Bo6g018480 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo6g018480 T057318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.815 0.776
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.815 0.776
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.804 0.862
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.804 0.862
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.804 0.862
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.804 0.862
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.804 0.862
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.804 0.862
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.792 0.638
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.792 0.638
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.790 0.655
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.787 0.690
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g018480.1 bZIP 283 340

Links

Other bZIP family TFs
Other Brassica oleracea TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.829
Bra018800 Brassica rapa Bra018800 I 0.825
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.825
Ca_06458 Cicer arietinum Ca_06458 I 0.825
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.824
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.824
Bo1g114840 Brassica oleracea Bo1g114840 I 0.823
ABF1 Arabidopsis thaliana AT1G49720 D 0.818
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.816
ABF2 Arabidopsis thaliana AT1G45249 D 0.815
Bo6g006970 Brassica oleracea Bo6g006970 I 0.815
Bra040260 Brassica rapa Bra040260 I 0.815
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.815
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.815
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.815
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.815
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.812
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.810
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.810
Si030114m.g Setaria italica Si030114m.g I 0.809
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.809
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.809
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.809
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.809
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.809
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.806
Si013904m.g Setaria italica Si013904m.g I 0.806
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.806
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.805
OB09G19140 Oryza brachyantha OB09G19140 I 0.805
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.805
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.804
ABF3 Arabidopsis thaliana AT4G34000 D 0.803
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.803
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.802
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.801
Pm005288 Prunus mume Pm005288 I 0.801
MDP0000701734 Malus domestica MDP0000701734 I 0.801
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.801
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.800
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.800
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.800
Bo3g073080 Brassica oleracea Bo3g073080 I 0.799
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.799
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.799
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.799
ABF4 Arabidopsis thaliana AT3G19290 D 0.798
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.798
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I 0.797
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.797
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.797
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.795
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.794
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.794
OBART08G17810 Oryza barthii OBART08G17810 I 0.794
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.794
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.794
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.794
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.794
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.794
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.794
OS09G0456200 Oryza sativa OS09G0456200 I 0.794
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.794
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.794
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.792
TCM_007074 Theobroma cacao TCM_007074 I 0.792
Cla016272 Citrullus lanatus Cla016272 I 0.792
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.792
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.792
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.792
MDP0000248567 Malus domestica MDP0000248567 I 0.792
Bra011485 Brassica rapa Bra011485 I 0.791
F775_07568 Aegilops tauschii F775_07568 N 0.791
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.791
Traes_5BL_DE53199D3 Triticum aestivum Traes_5BL_DE53199D3 N 0.791
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.791
OS08G0471950 Oryza sativa OS08G0471950 D 0.790
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.790
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.790
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.790
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.789
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.789
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.789
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.789
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.788
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.788
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.788
Pm021430 Prunus mume Pm021430 I 0.788
Aquca_007_00660 Aquilegia coerulea Aquca_007_00660 I 0.788
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.788
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.788
Bo7g116570 Brassica oleracea Bo7g116570 I 0.787
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.787
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.787
Sb02g026570 Sorghum bicolor Sb02g026570 N 0.787
29801.m003176 Ricinus communis 29801.m003176 I 0.787
mgf002047m Mimulus guttatus mgf002047m I 0.787
mgf007524m Mimulus guttatus mgf007524m I 0.787
mgf014602m Mimulus guttatus mgf014602m I 0.787
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.787
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.787
PK18009.1 Cannabis sativa PK18009.1 D 0.787
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.787
Cla022926 Citrullus lanatus Cla022926 I 0.786
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.786
Bo5g115300 Brassica oleracea Bo5g115300 I 0.785
Bra022409 Brassica rapa Bra022409 I 0.785
Bra037533 Brassica rapa Bra037533 I 0.785
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.785
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.784
OB02G40680 Oryza brachyantha OB02G40680 I 0.784
OBART02G33770 Oryza barthii OBART02G33770 I 0.784
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.784
ABI5 Arabidopsis thaliana AT2G36270 D 0.783
GLYMA02G14880 Glycine max GLYMA02G14880 N 0.783
GLYMA10G08370 Glycine max GLYMA10G08370 I 0.783
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.783
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.783
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.782
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.782
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.782
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.782
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.782