Bra003500 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra003500 T057402_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.888 0.889
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.888 0.889
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003500.1-P bZIP 18 80

Links

Other bZIP family TFs
Other Brassica rapa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g079450 Brassica oleracea Bo6g079450 I 0.889
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.889
BZIP53 Arabidopsis thaliana AT3G62420 D 0.888
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.888
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.888
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.888
Bo8g097830 Brassica oleracea Bo8g097830 I 0.880
Bra007679 Brassica rapa Bra007679 I 0.880
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.840
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.835
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.835
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.835
MDP0000205823 Malus domestica MDP0000205823 I 0.831
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.829
MDP0000239026 Malus domestica MDP0000239026 I 0.828
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.826
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.825
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.825
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.825
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.825
Cla016841 Citrullus lanatus Cla016841 I 0.825
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.825
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.819
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.817
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.817
mgf018581m Mimulus guttatus mgf018581m I 0.816
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.815
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.815
Ca_03512 Cicer arietinum Ca_03512 I 0.814
Ca_01004 Cicer arietinum Ca_01004 I 0.813
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.812
30076.m004659 Ricinus communis 30076.m004659 I 0.811
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.811
PK07533.1 Cannabis sativa PK07533.1 I 0.811
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.810
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.809
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.809
30131.m007078 Ricinus communis 30131.m007078 I 0.809
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.809
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.809
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.809
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.807
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.806
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.805
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.804
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.803
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.802
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.802
mgf003466m Mimulus guttatus mgf003466m I 0.802
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.802
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.801
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.801
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.800
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.799
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.799
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.798
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.798
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.795
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.794
PK03779.1 Cannabis sativa PK03779.1 I 0.793
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.792
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I 0.792
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.792
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.792
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.791
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.791
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.791
Cla020641 Citrullus lanatus Cla020641 I 0.790
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.790
Bra039631 Brassica rapa Bra039631 I 0.788
MDP0000437680 Malus domestica MDP0000437680 I 0.788
TCM_004807 Theobroma cacao TCM_004807 I 0.787
MDP0000234798 Malus domestica MDP0000234798 I 0.787
MDP0000949327 Malus domestica MDP0000949327 I 0.787
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I 0.786
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.786
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.785
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.785
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.783
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.783
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.783
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.783
Pm002353 Prunus mume Pm002353 I 0.783
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.783
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.782
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.782
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.782
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.782