Bra011701 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra011701 T057438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.876 0.875
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.876 0.875
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.876 0.875
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.876 0.875
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.876 0.875
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.840 0.672
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.840 0.672
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.835 0.656
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.835 0.656
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.833 0.625
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.833 0.625
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.830 0.656
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.830 0.656
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN

NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.822 0.672
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV

BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.820 0.641
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW

WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.817 0.625
EMBP1_WHEAT
M09921_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
0.817 0.625
EMBP1_WHEAT
M09922_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
0.817 0.625
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN

NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.817 0.641
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD

HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.813 0.641
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD

HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.813 0.641
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.813 0.641
CPRF1_PETCR
M10066_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.798 0.625
CPRF1_PETCR
M10067_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.798 0.625
CPRF1_PETCR
M10068_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.798 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011701.1-P bZIP 218 281

Links

Other bZIP family TFs
Other Brassica rapa TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL005176 Aedes aegypti AAEL005176 I
AAEL009230 Aedes aegypti AAEL009230 I
AAEL014359 Aedes aegypti AAEL014359 I
AATE010651 Anopheles atroparvus AATE010651 I
AATE020159 Anopheles atroparvus AATE020159 I
ACHR010032 Anopheles christyi ACHR010032 I
ACOM031677 Anopheles coluzzii ACOM031677 I
ACOM031685 Anopheles coluzzii ACOM031685 I
ACUA003488 Anopheles culicifacies ACUA003488 I
ACUA020861 Anopheles culicifacies ACUA020861 I
ACUA022497 Anopheles culicifacies ACUA022497 I
AFAF007486 Anopheles farauti AFAF007486 I
AFAF017001 Anopheles farauti AFAF017001 I
AFUN001835 Anopheles funestus AFUN001835 I
AFUN002786 Anopheles funestus AFUN002786 I
AGAP006791 Anopheles gambiae AGAP006791 I
AGAP006794 Anopheles gambiae AGAP006794 I
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I
AMEC013076 Anopheles melas AMEC013076 I
AMEC015586 Anopheles melas AMEC015586 I
AMEM013788 Anopheles merus AMEM013788 I
AMEM017035 Anopheles merus AMEM017035 I
AQUA003879 Anopheles quadriannulatus AQUA003879 I
ASIS012063 Anopheles sinensis ASIS012063 I
ASIS022059 Anopheles sinensis ASIS022059 I
ASTEI08595 Anopheles stephensi ASTEI08595 I
A_07725 Schistosoma haematobium A_07725 I
Bm4071 Brugia malayi Bm4071 N
CapteG149623 Capitella teleta CapteG149623 I
CapteG176021 Capitella teleta CapteG176021 I
CapteG223614 Capitella teleta CapteG223614 I
CapteG76620 Capitella teleta CapteG76620 I
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I
CGI_10023711 Crassostrea gigas CGI_10023711 I
CLEC001353 Cimex lectularius CLEC001353 I
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I
CPIJ004535 Culex quinquefasciatus CPIJ004535 I
CPIJ017517 Culex quinquefasciatus CPIJ017517 I
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I
csin111588 Clonorchis sinensis csin111588 I
D915_06717 Fasciola hepatica D915_06717 I
D917_06340 Trichinella nativa D917_06340 I
D918_03987 Trichuris suis D918_03987 I
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I
DME_0000421901 Dracunculus medinensis DME_0000421901 I
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I
EEL_0000648301 Elaeophora elaphi EEL_0000648301 N
EFV52761 Trichinella spiralis EFV52761 I
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I
GD13794 Drosophila simulans FBgn0185494 I
GE21392 Drosophila yakuba FBgn0238652 I
GF25020 Drosophila ananassae FBgn0102012 I
GG15174 Drosophila erecta FBgn0107427 I
GH15771 Drosophila grimshawi FBgn0123242 I
GI12551 Drosophila mojavensis FBgn0135308 I
GJ16103 Drosophila virilis FBgn0203288 I
GK17507 Drosophila willistoni FBgn0219506 I
GM11368 Drosophila sechellia FBgn0166311 I
GM14603 Drosophila sechellia FBgn0169524 I
HHAL001092-PA Halyomorpha halys HHAL001092-PA I
HHAL001095-PA Halyomorpha halys HHAL001095-PA I
ISCW021315 Ixodes scapularis ISCW021315 I
L596_g15116 Steinernema carpocapsae L596_g15116 I
L798_11766 Zootermopsis nevadensis L798_11766 I
L889_g21793 Steinernema feltiae L889_g21793 I
L892_g9690 Steinernema scapterisci L892_g9690 I
L893_g27175 Steinernema glaseri L893_g27175 I
L898_g5709 Steinernema monticolum L898_g5709 I
LCUP005780 Lucilia cuprina LCUP005780 I
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I
LOAG_08891 Loa loa LOAG_08891 I
LotgiG58520 Lottia gigantea LotgiG58520 I
MDOA005810 Musca domestica MDOA005810 I
nAv.1.0.1.g07581 Acanthocheilonema viteae nAv.1.0.1.g07581 N
nOo.2.0.1.g10180 Onchocerca ochengi nOo.2.0.1.g10180 N
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I
Ogr05737 Ophisaurus gracilis Ogr05737 I
PHUM474180 Pediculus humanus PHUM474180 I
PPAI000594 Phlebotomus papatasi PPAI000594 I
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I
Pvit_17685 Pogona vitticeps Pvit_17685 I
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I
scrt Drosophila melanogaster FBgn0004880 D
SCRT1 Bos taurus ENSBTAG00000046208 I
SCRT1 Callithrix jacchus ENSCJAG00000021406 I
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I
SCRT1 Homo sapiens ENSG00000261678 D
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I
SCRT1 Gorilla gorilla ENSGGOG00000013612 I
SCRT1 Loxodonta africana ENSLAFG00000031587 I
SCRT1 Macaca mulatta ENSMMUG00000028886 I
Scrt1 Mus musculus ENSMUSG00000048385 I
SCRT1 Otolemur garnettii ENSOGAG00000026538 I
Scrt1 Rattus norvegicus ENSRNOG00000025594 I
SCRT1 Sus scrofa ENSSSCG00000025879 I
SCRT1 Takifugu rubripes ENSTRUG00000012719 I
scrt1a Danio rerio ENSDARG00000100821 I
scrt1b Danio rerio ENSDARG00000040214 I
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I
scrt1b Oryzias latipes ENSORLG00000008641 I
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I
scrt1b Takifugu rubripes ENSTRUG00000011637 I
SCRT2 Anolis carolinensis ENSACAG00000016109 I
SCRT2 Callithrix jacchus ENSCJAG00000020870 I
SCRT2 Cavia porcellus ENSCPOG00000008447 I
scrt2 Danio rerio ENSDARG00000056175 I
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I
SCRT2 Felis catus ENSFCAG00000010922 I
SCRT2 Homo sapiens ENSG00000215397 D
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I
SCRT2 Gallus gallus ENSGALG00000028912 I
SCRT2 Loxodonta africana ENSLAFG00000030340 I
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I
SCRT2 Monodelphis domestica ENSMODG00000019528 I
Scrt2 Mus musculus ENSMUSG00000060257 I
SCRT2 Otolemur garnettii ENSOGAG00000031187 I
scrt2 Oryzias latipes ENSORLG00000015072 I
Scrt2 Rattus norvegicus ENSRNOG00000005148 I
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I
scrt2 Takifugu rubripes ENSTRUG00000007620 I
SCRT2 Tursiops truncatus ENSTTRG00000007039 I
scrt2 Xenopus tropicalis XB-GENE-5995512 I
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I
SMAR010760 Strigamia maritima SMAR010760 I
Smp_054430 Schistosoma mansoni Smp_054430 I
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I
SMU15013927 Schmidtea mediterranea SMU15013927 I
SMUV_0000843501 Syphacia muris SMUV_0000843501 I
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I
T265_09545 Opisthorchis viverrini T265_09545 I
TCNE_0000669301 Toxocara canis TCNE_0000669301 I
tetur08g05890 Tetranychus urticae tetur08g05890 I
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I
WBGene00237257 Onchocerca volvulus WBGene00237257 N
WUBG_08818 Wuchereria bancrofti WUBG_08818 N