CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra024310
(
Brassica rapa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bra024310
T057478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.794
0.730
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024310.1-P
bZIP
153
215
TDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVNQLRAEHSTLLGRLGDMNQKYDAAAVDNR
Links
Other
bZIP
family TFs
Other
Brassica rapa
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra007083
Brassica rapa
Bra007083
I
0.909
Bo8g084770
Brassica oleracea
Bo8g084770
I
0.908
BZIP25
Arabidopsis thaliana
AT3G54620
I
0.904
Bostr.0697s0074
Boechera stricta
Bostr.0697s0074
I
0.904
Cagra.0562s0051
Capsella grandiflora
Cagra.0562s0051
I
0.904
Carubv10017372m.g
Capsella rubella
Carubv10017372m.g
I
0.904
Thhalv10010426m.g
Eutrema salsugineum
Thhalv10010426m.g
I
0.904
Bo4g119810
Brassica oleracea
Bo4g119810
I
0.902
Bra014802
Brassica rapa
Bra014802
I
0.902
ATBZIP25
Arabidopsis lyrata
scaffold_502576.1
N
0.889
Bo3g032910
Brassica oleracea
Bo3g032910
N
0.878
PRUPE_ppa005367mg
Prunus persica
PRUPE_ppa005367mg
I
0.818
Pm020231
Prunus mume
Pm020231
I
0.818
PK11472.1
Cannabis sativa
PK11472.1
I
0.816
Bra000102
Brassica rapa
Bra000102
I
0.807
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.801
Lus10018759.g
Linum usitatissimum
Lus10018759.g
I
0.801
Ca_03753
Cicer arietinum
Ca_03753
I
0.794
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
0.794
PK05128.1
Cannabis sativa
PK05128.1
D
0.794
MDP0000176747
Malus domestica
MDP0000176747
I
0.791
Ciclev10001051m.g
Citrus clementina
Ciclev10001051m.g
I
0.789
GSMUA_Achr7G07650_001
Musa acuminata
GSMUA_Achr7G07650_001
I
0.787
Cla015037
Citrullus lanatus
Cla015037
I
0.784
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
0.784
VIT_07s0141g00170
Vitis vinifera
VIT_07s0141g00170
I
0.782