CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G68560
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI1G68560
T057559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.797
0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.797
0.625
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.784
0.688
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G68560.1
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
300
363
EREVKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKRLQEKCDSLTSENT
BRADI1G68560.3
bZIP
345
379
KEELKRLQEKCDSLTSENTSLHEKLKELDGEKSNG
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1372692g002
Phoenix dactylifera
PDK_20s1372692g002
I
0.825
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I
0.825
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
0.812
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
0.812
MDP0000231274
Malus domestica
MDP0000231274
I
0.811
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.809
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
0.801
GLYMA01G01740
Glycine max
GLYMA01G01740
I
0.800
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
0.800
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.800
Cla014415
Citrullus lanatus
Cla014415
I
0.800
Pm026586
Prunus mume
Pm026586
I
0.800
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.800
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
0.800
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
0.800
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.799
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.797
Bra005335
Brassica rapa
Bra005335
I
0.797
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
0.797
TCM_000436
Theobroma cacao
TCM_000436
I
0.797
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.797
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
0.797
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
0.797
PDK_20s1368181g001
Phoenix dactylifera
PDK_20s1368181g001
I
0.796
GLYMA09G34170
Glycine max
GLYMA09G34170
I
0.795
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.795
MTR_5g028850
Medicago truncatula
MTR_5g028850
I
0.795
VIT_02s0012g02250
Vitis vinifera
VIT_02s0012g02250
I
0.795
Ca_11455
Cicer arietinum
Ca_11455
I
0.795
Cla016502
Citrullus lanatus
Cla016502
I
0.795
Ciclev10001333m.g
Citrus clementina
Ciclev10001333m.g
I
0.795
Eucgr.E00223
Eucalyptus grandis
Eucgr.E00223
I
0.795
Gorai.003G185700
Gossypium raimondii
Gorai.003G185700
I
0.795
orange1.1g036551m.g
Citrus sinensis
orange1.1g036551m.g
I
0.795
SapurV1A.0051s0250
Salix purpurea
SapurV1A.0051s0250
I
0.795
chr2.LjT41P23.50.nc
Lotus japonicus
chr2.LjT41P23.50.nc
I
0.795
LjSGA_036158.1
Lotus japonicus
LjSGA_036158.1
I
0.795
GLYMA02G06550
Glycine max
GLYMA02G06550
I
0.794
GLYMA16G25600
Glycine max
GLYMA16G25600
I
0.794
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
0.794
Cucsa.312800
Cucumis sativus
Cucsa.312800
I
0.794
GSMUA_Achr4G04530_001
Musa acuminata
GSMUA_Achr4G04530_001
I
0.793
Solyc08g076100.2
Solanum lycopersicum
Solyc08g076100.2
I
0.791
mgf000639m
Mimulus guttatus
mgf000639m
I
0.790
mgf005151m
Mimulus guttatus
mgf005151m
I
0.790
mgf014804m
Mimulus guttatus
mgf014804m
I
0.790
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
0.790
GSMUA_Achr4G18980_001
Musa acuminata
GSMUA_Achr4G18980_001
I
0.789
GSMUA_Achr5G14150_001
Musa acuminata
GSMUA_Achr5G14150_001
I
0.789
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
0.788
PGSC0003DMG400018469
Solanum tuberosum
PGSC0003DMG400018469
I
0.786
Solyc08g005290.2
Solanum lycopersicum
Solyc08g005290.2
I
0.786
mgf008195m
Mimulus guttatus
mgf008195m
I
0.786
evm.TU.supercontig_2741.1
Carica papaya
evm.TU.supercontig_2741.1
I
0.786
BGIOSGA036419
Oryza indica
BGIOSGA036419
I
0.784
GLYMA01G38381
Glycine max
GLYMA01G38381
I
0.784
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.784
GRMZM2G074373
Zea mays
GRMZM2G074373
I
0.784
LPERR12G05920
Leersia perrieri
LPERR12G05920
I
0.784
OB12G16310
Oryza brachyantha
OB12G16310
I
0.784
OBART12G06770
Oryza barthii
OBART12G06770
I
0.784
OGLUM12G08090
Oryza glumaepatula
OGLUM12G08090
I
0.784
OLONG_021967
Oryza longistaminata
OLONG_021967
I
0.784
OMERI12G04560
Oryza meridionalis
OMERI12G04560
I
0.784
ONIVA12G06500
Oryza nivara
ONIVA12G06500
I
0.784
OPUNC12G06450
Oryza punctata
OPUNC12G06450
I
0.784
ORGLA12G0063500
Oryza glaberrima
ORGLA12G0063500
I
0.784
ORUFI12G07600
Oryza rufipogon
ORUFI12G07600
I
0.784
POPTR_0001s01840
Populus trichocarpa
POPTR_0001s01840
I
0.784
POPTR_0003s09630
Populus trichocarpa
POPTR_0003s09630
I
0.784
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
0.784
Sb08g008300
Sorghum bicolor
Sb08g008300
I
0.784
Si022325m.g
Setaria italica
Si022325m.g
I
0.784
Pm023132
Prunus mume
Pm023132
I
0.784
30068.m002661
Ricinus communis
30068.m002661
I
0.784
cassava11837.valid.m1
Manihot esculenta
cassava11837.valid.m1
I
0.784
cassava37043.valid.m1
Manihot esculenta
cassava37043.valid.m1
I
0.784
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
0.784
MDP0000185553
Malus domestica
MDP0000185553
I
0.784
MDP0000286846
Malus domestica
MDP0000286846
I
0.784
Pavir.Ca00403
Panicum virgatum
Pavir.Ca00403
I
0.784
Pavir.Cb01814
Panicum virgatum
Pavir.Cb01814
I
0.784
SapurV1A.0063s0130
Salix purpurea
SapurV1A.0063s0130
I
0.784
PK23964.1
Cannabis sativa
PK23964.1
D
0.784
GSMUA_Achr4G11610_001
Musa acuminata
GSMUA_Achr4G11610_001
I
0.783
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
0.783