CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HLF
(
Bos taurus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSBTAG00000006618
T059069_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.896
1.000
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.896
1.000
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.896
1.000
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.896
1.000
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.896
1.000
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.896
1.000
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.896
1.000
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.896
1.000
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.847
0.794
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.847
0.794
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.847
0.794
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.847
0.794
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.847
0.794
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.847
0.794
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.847
0.794
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.847
0.794
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.847
0.794
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.795
0.683
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.795
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000008682
bZIP
224
286
KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA
Links
Other
bZIP
family TFs
Other
Bos taurus
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDE_05043
Penicillium oxalicum
PDE_05043
N
PMAA_022780
Penicillium marneffei
PMAA_022780
N
Pc18g00950
Penicillium chrysogenum
Pc18g00950
N
fgenesh1_pg.00261_#_2
Aspergillus carbonarius
fgenesh1_pg.00261_#_2
N
U727_00433930291
Penicillium solitum
U727_00433930291
N
TSTA_031320
Talaromyces stipitatus
TSTA_031320
N
PMAA_022780
Talaromyces marneffei
PMAA_022780
N
PITC_012760
Penicillium italicum
PITC_012760
N
PEX1_032410
Penicillium expansum
PEX1_032410
N
ACLA_040490
Aspergillus clavatus
CADACLAG00003318
N
PCH_Pc18g00950
Penicillium rubens
PCH_Pc18g00950
N
EURHEDRAFT_458386
Aspergillus ruber
EURHEDRAFT_458386
N
NFIA_064640
Neosartorya fischeri
CADNFIAG00005943
N
ATEG_04131
Aspergillus terreus
CADATEAG00009697
N
CADAORAG00006390
Aspergillus oryzae
CADAORAG00006390
N
ANIA_03108
Aspergillus nidulans
CADANIAG00009968
N
AFUA_3G12660
Aspergillus fumigatus
CADAFUAG00005111
N
CADAFLAG00003989
Aspergillus flavus
CADAFLAG00003989
N