CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCING00000023347
(
Ciona intestinalis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSCING00000023347
T059204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOS
M04327_2.00
Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV
SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX
0.872
0.698
FOS
M08069_2.00
Homo sapiens
DVTGASTCATN
NATGASTCABH
ChIP-seq
Mathelier et al.(2014)
MA0476.1
0.872
0.698
FOS
M07826_2.00
Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford
0.872
0.698
FOS
M07827_2.00
Homo sapiens
MTGASTCAYHN
NDRTGASTCAK
ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD
0.872
0.698
FOS
M07828_2.00
Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV
ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago
0.872
0.698
FOS
M08802_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A
0.872
0.698
Fos
M08819_2.00
Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN
Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A
0.872
0.698
FOS
M09988_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q4
0.872
0.698
FOS
M09989_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CFOS_Q6
0.872
0.698
FOS
M09990_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_02
0.872
0.698
FOS
M09991_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOS_03
0.872
0.698
FOS
M04328_2.00
Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB
SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX
0.872
0.698
Fosl2
M01809_2.00
Mus musculus
GATGACKH
DMGTCATC
PBM
Weirauch et al.(2014)
pTH5108
0.848
0.651
Fosl2
M08828_2.00
Mus musculus
NVTGACTCABN
NVTGAGTCABN
Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A
0.848
0.651
Fosl2
M09494_2.00
Mus musculus
NNVTGASTCABN
NVTGASTCABNN
Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872
0.848
0.651
FOSB
M04272_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX
0.846
0.667
FOSB
M08795_2.00
Homo sapiens
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A
0.846
0.667
Fosb
M08814_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A
0.846
0.667
FOSB
M04273_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX
0.846
0.667
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000034304
bZIP
192
254
AEATKRHIRRERNKIAAAKCRNRRRELTDRLQGETDHLEDHQSILHQEIMSLQQEKEHLEFLL
Links
Other
bZIP
family TFs
Other
Ciona intestinalis
TFs
231 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_073680
Schistosoma mansoni
Smp_073680
N
Sjc_0040590
Schistosoma japonicum
Sjc_0040590
N
A_02598
Schistosoma haematobium
A_02598
N
DILT_0001004901
Diphyllobothrium latum
DILT_0001004901
N
EmuJ_000419500
Echinococcus multilocularis
EmuJ_000419500
N
HDID_0000507901
Hymenolepis diminuta
HDID_0000507901
N
HmN_000865600
Hymenolepis microstoma
HmN_000865600
N
MCOS_0000070201
Mesocestoides corti
MCOS_0000070201
N
SCUD_0000710001
Schistosoma curassoni
SCUD_0000710001
N
SMRZ_0000513201
Schistosoma margrebowiei
SMRZ_0000513201
N
SROB_0001853501
Schistosoma rodhaini
SROB_0001853501
N
T265_05686
Opisthorchis viverrini
T265_05686
N
TASK_0000929501
Taenia asiatica
TASK_0000929501
N
TRE_0001104801
Trichobilharzia regenti
TRE_0001104801
N
TsM_000321300
Taenia solium
TsM_000321300
N