CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATF3
(
Callithrix jacchus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSCJAG00000015735
T059238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN
NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.786
0.757
ATF3
M04321_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX
0.786
0.861
Atf3
M01807_2.00
Mus musculus
GATGACGY
RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.786
0.757
ATF3
M04323_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX
0.786
0.861
ATF3
M04032_2.00
Homo sapiens
RTGACGTCAK
MTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1
0.786
0.861
Atf3
M08825_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.892
0.903
ATF3
M04033_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2
0.786
0.861
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.881
0.726
ATF3
M07822_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha
0.786
0.861
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB
VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.881
0.726
ATF3
M07823_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha
0.786
0.861
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.881
0.726
ATF3
M07824_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha
0.786
0.861
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN
NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.881
0.726
ATF3
M07825_2.00
Homo sapiens
VRTSACGTVR
YBACGTSAYB
ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard
0.786
0.861
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV
BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.881
0.726
ATF3
M08187_2.00
Homo sapiens
GTCACGTG
CACGTGAC
ChIP-seq
Contrino et al.(2012)
Mv41
0.786
0.861
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.881
0.726
ATF3
M08188_2.00
Homo sapiens
NRTGASTCAY
RTGASTCAYN
ChIP-seq
Contrino et al.(2012)
Mv43
0.786
0.861
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.881
0.726
ATF3
M08801_2.00
Homo sapiens
RRTSACGTVRB
VYBACGTSAYY
Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A
0.786
0.861
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.881
0.726
ATF3
M09489_2.00
Homo sapiens
NVTGASTCABNN
NNVTGASTCABN
Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912
0.786
0.861
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN
NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.881
0.726
ATF3
M09977_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_02
0.786
0.861
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.881
0.726
ATF3
M09978_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_05
0.786
0.861
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.881
0.726
ATF3
M09979_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_01
0.786
0.861
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.881
0.726
ATF3
M09980_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_02
0.786
0.861
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN
NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.879
0.726
ATF3
M09981_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6
0.786
0.861
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW
WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.879
0.726
ATF3
M04322_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX
0.786
0.861
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.879
0.726
ATF3
M04324_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX
0.786
0.861
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN
NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.879
0.726
Jdp2
M10033_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.879
0.726
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.789
0.581
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000028977
bZIP
83
119
PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKVSAV
ENSCJAP00000047293
bZIP
54
89
PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKLPR
ENSCJAP00000049870
bZIP
83
118
PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKLPR
ENSCJAP00000051643
bZIP
83
144
PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYM
ENSCJAP00000052036
bZIP
83
144
PEEDERKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYM
Links
Other
bZIP
family TFs
Other
Callithrix jacchus
TFs
173 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATF3
Erinaceus europaeus
ENSEEUG00000010993
I
0.903
ATF3
Procavia capensis
ENSPCAG00000000178
I
0.903
ENSLACG00000001315
Latimeria chalumnae
ENSLACG00000001315
I
0.897
ENSAMEG00000001342
Ailuropoda melanoleuca
ENSAMEG00000001342
I
0.892
ENSAMXG00000010494
Astyanax mexicanus
ENSAMXG00000010494
I
0.892
ATF3
Bos taurus
ENSBTAG00000008545
I
0.892
ATF3
Canis familiaris
ENSCAFG00000012339
I
0.892
ATF3
Choloepus hoffmanni
ENSCHOG00000010259
I
0.892
ENSCPOG00000019424
Cavia porcellus
ENSCPOG00000019424
I
0.892
ENSCSAG00000015405
Chlorocebus sabaeus
ENSCSAG00000015405
I
0.892
atf3
Danio rerio
ENSDARG00000007823
I
0.892
ENSDORG00000006025
Dipodomys ordii
ENSDORG00000006025
I
0.892
ATF3
Equus caballus
ENSECAG00000011486
I
0.892
ATF3
Echinops telfairi
ENSETEG00000015701
I
0.892
ATF3
Felis catus
ENSFCAG00000029636
I
0.892
ATF3
Homo sapiens
ENSG00000162772
D
0.892
ATF3
Gorilla gorilla
ENSGGOG00000014206
I
0.892
ATF3
Loxodonta africana
ENSLAFG00000032487
I
0.892
ENSMEUG00000007708
Macropus eugenii
ENSMEUG00000007708
I
0.892
ATF3
Myotis lucifugus
ENSMLUG00000015048
I
0.892
ATF3
Macaca mulatta
ENSMMUG00000012185
I
0.892
ATF3
Monodelphis domestica
ENSMODG00000003042
I
0.892
ENSMPUG00000015864
Mustela putorius furo
ENSMPUG00000015864
I
0.892
Atf3
Mus musculus
ENSMUSG00000026628
D
0.892
ENSNLEG00000002916
Nomascus leucogenys
ENSNLEG00000002916
I
0.892
ATF3
Ornithorhynchus anatinus
ENSOANG00000008502
I
0.892
ENSOARG00000010493
Ovis aries
ENSOARG00000010493
I
0.892
ATF3
Oryctolagus cuniculus
ENSOCUG00000017424
I
0.892
ATF3
Otolemur garnettii
ENSOGAG00000005803
I
0.892
ATF3
Ochotona princeps
ENSOPRG00000013252
I
0.892
ENSPANG00000021687
Papio anubis
ENSPANG00000021687
I
0.892
ENSPPYG00000000235
Pongo abelii
ENSPPYG00000000235
I
0.892
ATF3
Pan troglodytes
ENSPTRG00000001962
I
0.892
Atf3
Rattus norvegicus
ENSRNOG00000003745
I
0.892
ENSSHAG00000010413
Sarcophilus harrisii
ENSSHAG00000010413
I
0.892
ATF3
Sus scrofa
ENSSSCG00000015595
I
0.892
ENSSTOG00000007121
Ictidomys tridecemlineatus
ENSSTOG00000007121
I
0.892
ATF3
Tupaia belangeri
ENSTBEG00000002717
I
0.892
ENSTSYG00000010193
Tarsius syrichta
ENSTSYG00000010193
I
0.892
ATF3
Tursiops truncatus
ENSTTRG00000013897
I
0.892
ATF3
Vicugna pacos
ENSVPAG00000011563
I
0.892
ENSBTAP00000011265-D1
Bos grunniens
ENSBTAP00000011265-D1
I
0.892
ENSP00000355954
Macaca fascicularis
ENSP00000355954
I
0.892
Myotis_brandtii_Atf3_10018256
Myotis brandtii
Myotis_brandtii_Atf3_10018256
I
0.892
ENSDNOG00000044236
Dasypus novemcinctus
ENSDNOG00000044236
I
0.891
ENSPFOG00000017099
Poecilia formosa
ENSPFOG00000017099
I
0.891
ENSXMAG00000004443
Xiphophorus maculatus
ENSXMAG00000004443
I
0.891
ATF3
Anolis carolinensis
ENSACAG00000006353
I
0.890
ENSAPLG00000012304
Anas platyrhynchos
ENSAPLG00000012304
I
0.890
ENSFALG00000012408
Ficedula albicollis
ENSFALG00000012408
I
0.890
ATF3
Gallus gallus
ENSGALG00000025887
I
0.890
ATF3
Meleagris gallopavo
ENSMGAG00000009708
I
0.890
ENSPSIG00000017967
Pelodiscus sinensis
ENSPSIG00000017967
I
0.890
ATF3
Taeniopygia guttata
ENSTGUG00000003050
I
0.890
Aan_R000237
Calypte anna
Aan_R000237
I
0.890
Aan_R011482
Calypte anna
Aan_R011482
I
0.890
Afo_R004731
Aptenodytes forsteri
Afo_R004731
I
0.890
Alligator_sinensis_CCG002912.1
Alligator sinensis
Alligator_sinensis_CCG002912.1
I
0.890
Brh_R009866
Buceros rhinoceros
Brh_R009866
I
0.890
Cmyd_10020806
Chelonia mydas
Cmyd_10020806
I
0.890
Gfo_R010939
Geospiza fortis
Gfo_R010939
I
0.890
Ogr11165
Ophisaurus gracilis
Ogr11165
I
0.890
Tal_R002996
Tyto alba
Tal_R002996
I
0.890
JDP2
Anolis carolinensis
ENSACAG00000016944
I
0.881
ENSAMEG00000018337
Ailuropoda melanoleuca
ENSAMEG00000018337
I
0.881
ENSAMXG00000014502
Astyanax mexicanus
ENSAMXG00000014502
I
0.881
ENSAPLG00000011380
Anas platyrhynchos
ENSAPLG00000011380
I
0.881
JDP2
Bos taurus
ENSBTAG00000009451
I
0.881
JDP2
Canis familiaris
ENSCAFG00000017042
I
0.881
JDP2
Callithrix jacchus
ENSCJAG00000020645
I
0.881
ENSCPOG00000006636
Cavia porcellus
ENSCPOG00000006636
I
0.881
ENSCSAG00000012122
Chlorocebus sabaeus
ENSCSAG00000012122
I
0.881
jdp2a
Danio rerio
ENSDARG00000040137
I
0.881
JDP2
Dasypus novemcinctus
ENSDNOG00000033141
I
0.881
ENSDORG00000012888
Dipodomys ordii
ENSDORG00000012888
I
0.881
JDP2
Equus caballus
ENSECAG00000014862
I
0.881
ENSFALG00000006358
Ficedula albicollis
ENSFALG00000006358
I
0.881
JDP2
Felis catus
ENSFCAG00000029464
I
0.881
JDP2
Homo sapiens
ENSG00000140044
D
0.881
JDP2
Gallus gallus
ENSGALG00000010322
I
0.881
JDP2
Gorilla gorilla
ENSGGOG00000010752
I
0.881
JDP2
Loxodonta africana
ENSLAFG00000025757
I
0.881
ENSLOCG00000010526
Lepisosteus oculatus
ENSLOCG00000010526
I
0.881
ENSMEUG00000011212
Macropus eugenii
ENSMEUG00000011212
I
0.881
JDP2
Meleagris gallopavo
ENSMGAG00000012755
I
0.881
ENSMICG00000016031
Microcebus murinus
ENSMICG00000016031
I
0.881
ENSMLUG00000002256
Myotis lucifugus
ENSMLUG00000002256
I
0.881
JDP2
Monodelphis domestica
ENSMODG00000005909
I
0.881
ENSMPUG00000009147
Mustela putorius furo
ENSMPUG00000009147
I
0.881
ENSNLEG00000016475
Nomascus leucogenys
ENSNLEG00000016475
I
0.881
ENSOARG00000001796
Ovis aries
ENSOARG00000001796
I
0.881
JDP2
Oryctolagus cuniculus
ENSOCUG00000008466
I
0.881
JDP2
Otolemur garnettii
ENSOGAG00000024796
I
0.881
JDP2
Ochotona princeps
ENSOPRG00000012032
I
0.881
ENSPANG00000019986
Papio anubis
ENSPANG00000019986
I
0.881
ENSPPYG00000006004
Pongo abelii
ENSPPYG00000006004
I
0.881
JDP2
Pan troglodytes
ENSPTRG00000006555
I
0.881
JDP2
Pteropus vampyrus
ENSPVAG00000000672
I
0.881
ENSSHAG00000017391
Sarcophilus harrisii
ENSSHAG00000017391
I
0.881
ENSSTOG00000026831
Ictidomys tridecemlineatus
ENSSTOG00000026831
I
0.881
ENSTBEG00000014483
Tupaia belangeri
ENSTBEG00000014483
I
0.881
JDP2
Taeniopygia guttata
ENSTGUG00000012219
I
0.881
Aan_R005677
Calypte anna
Aan_R005677
I
0.881
Afo_R004508
Aptenodytes forsteri
Afo_R004508
I
0.881
ENSMMUP00000003747
Macaca fascicularis
ENSMMUP00000003747
I
0.881
ENSP00000267569-D1
Bos grunniens
ENSP00000267569-D1
I
0.881
Gfo_R012906
Geospiza fortis
Gfo_R012906
I
0.881
Myotis_brandtii_JDP2_10012947
Myotis brandtii
Myotis_brandtii_JDP2_10012947
I
0.881
Ogr08030
Ophisaurus gracilis
Ogr08030
I
0.881
Pvit_01216
Pogona vitticeps
Pvit_01216
I
0.881
atf3
Gasterosteus aculeatus
ENSGACG00000011997
I
0.880
Jdp2
Mus musculus
ENSMUSG00000034271
D
0.879
Jdp2
Rattus norvegicus
ENSRNOG00000008224
D
0.879
Pvit_13387
Pogona vitticeps
Pvit_13387
I
0.878
ENSONIG00000018687
Oreochromis niloticus
ENSONIG00000018687
I
0.877
ENSLOCG00000000814
Lepisosteus oculatus
ENSLOCG00000000814
I
0.876
ENSGMOG00000016268
Gadus morhua
ENSGMOG00000016268
I
0.875
ENSLACG00000018083
Latimeria chalumnae
ENSLACG00000018083
I
0.874
ENSTNIG00000016355
Tetraodon nigroviridis
ENSTNIG00000016355
I
0.874
jdp2b
Takifugu rubripes
ENSTRUG00000010344
I
0.874
atf3
Xenopus tropicalis
XB-GENE-6085251
I
0.874
jdp2a
Oryzias latipes
ENSORLG00000016515
I
0.873
jdp2b
Oryzias latipes
ENSORLG00000017506
I
0.873
ENSONIG00000015268
Oreochromis niloticus
ENSONIG00000015268
I
0.872
ENSPFOG00000007886
Poecilia formosa
ENSPFOG00000007886
I
0.872
ENSPFOG00000007903
Poecilia formosa
ENSPFOG00000007903
I
0.872
ENSXMAG00000004013
Xiphophorus maculatus
ENSXMAG00000004013
I
0.872
atf3
Takifugu rubripes
ENSTRUG00000015975
I
0.871
ENSAMXG00000013804
Astyanax mexicanus
ENSAMXG00000013804
I
0.870
ENSONIG00000020186
Oreochromis niloticus
ENSONIG00000020186
I
0.867
ENSPFOG00000015014
Poecilia formosa
ENSPFOG00000015014
I
0.867
jdp2a
Tetraodon nigroviridis
ENSTNIG00000017406
I
0.867
ENSXMAG00000014805
Xiphophorus maculatus
ENSXMAG00000014805
I
0.867
atf3
Oryzias latipes
ENSORLG00000019980
I
0.866
atf3.L
Xenopus laevis
XB-GENE-6085256
I
0.866
jdp2a
Gasterosteus aculeatus
ENSGACG00000007611
I
0.861
atf3
Tetraodon nigroviridis
ENSTNIG00000002524
I
0.860
jdp2a
Takifugu rubripes
ENSTRUG00000018323
I
0.858
jdp2b
Gasterosteus aculeatus
ENSGACG00000010513
I
0.854
ENSGMOG00000011063
Gadus morhua
ENSGMOG00000011063
I
0.854
ENSPSIG00000017647
Pelodiscus sinensis
ENSPSIG00000017647
I
0.854
jdp2b
Danio rerio
ENSDARG00000020133
I
0.849
ENSGMOG00000015382
Gadus morhua
ENSGMOG00000015382
I
0.846
Brh_R010146
Buceros rhinoceros
Brh_R010146
I
0.846
ENSPMAG00000000427
Petromyzon marinus
ENSPMAG00000000427
I
0.838
ISCW023105
Ixodes scapularis
ISCW023105
I
0.831
DAPPUDRAFT_222762
Daphnia pulex
DAPPUDRAFT_222762
I
0.809
ENSCSAVG00000000153
Ciona savignyi
ENSCSAVG00000000153
I
0.803
TC008201
Tribolium castaneum
TC008201
I
0.801
CLEC002857
Cimex lectularius
CLEC002857
I
0.800
GB53401
Apis mellifera
GB53401
I
0.796
SINV20083
Solenopsis invicta
SINV20083
I
0.796
Cflo_05052--XP_392513.1_APIME
Camponotus floridanus
Cflo_05052--XP_392513.1_APIME
I
0.796
Hsal_14793--XP_392513.1_APIME
Harpegnathos saltator
Hsal_14793--XP_392513.1_APIME
I
0.796
HMEL006570
Heliconius melpomene
HMEL006570
I
0.792
MCINX010628
Melitaea cinxia
MCINX010628
I
0.792
RPRC001561
Rhodnius prolixus
RPRC001561
I
0.792
LDEC018714
Leptinotarsa decemlineata
LDEC018714
I
0.791
Atf3
Drosophila melanogaster
FBgn0028550
D
0.789
ACYPI32234
Acyrthosiphon pisum
ACYPI32234
I
0.787
ENSPMAG00000006157
Petromyzon marinus
ENSPMAG00000006157
I
0.787
PHUM288370
Pediculus humanus
PHUM288370
I
0.787
ATF3
Pteropus vampyrus
ENSPVAG00000011826
I
0.786
ENSVPAG00000003090
Vicugna pacos
ENSVPAG00000003090
I
0.786
Tal_R007524
Tyto alba
Tal_R007524
I
0.786
AAEL009442
Aedes aegypti
AAEL009442
I
0.785
GA10981
Drosophila pseudoobscura
FBgn0071037
I
0.784
GH24925
Drosophila grimshawi
FBgn0132380
I
0.784
GL14394
Drosophila persimilis
FBgn0151999
I
0.784
GK19912
Drosophila willistoni
FBgn0221909
I
0.784
NV16727
Nasonia vitripennis
NV16727
I
0.784
KGM_03513
Danaus plexippus
KGM_03513
I
0.782