CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G05050_001
(
Musa acuminata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GSMUA_Achr1G05050_001
T063237_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.831
0.719
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.830
0.750
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.826
0.688
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.824
0.719
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.824
0.719
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.816
0.672
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.811
0.562
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.811
0.562
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.811
0.562
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.811
0.562
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.811
0.562
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.808
0.734
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.808
0.734
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.808
0.734
CPRF3_PETCR
M10071_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_01
0.796
0.547
CPRF3_PETCR
M10072_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_Q2
0.796
0.547
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.783
0.578
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.783
0.578
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.782
0.578
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.782
0.578
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P05050_001
bZIP
285
348
ERSLKRERRKQSNRESARRSRLRKQAENEELAKKVEALSAENRTLISKISQVTESSETLRLENA
Links
Other
bZIP
family TFs
Other
Musa acuminata
TFs
188 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA03G41590
Glycine max
GLYMA03G41590
I
0.845
GLYMA19G44190
Glycine max
GLYMA19G44190
I
0.845
TCM_005210
Theobroma cacao
TCM_005210
I
0.845
Gorai.004G153100
Gossypium raimondii
Gorai.004G153100
I
0.845
Gorai.008G123200
Gossypium raimondii
Gorai.008G123200
I
0.845
VIT_02s0025g01020
Vitis vinifera
VIT_02s0025g01020
I
0.842
Eucgr.E00078
Eucalyptus grandis
Eucgr.E00078
I
0.838
Bostr.7365s0064
Boechera stricta
Bostr.7365s0064
I
0.835
Cagra.1372s0011
Capsella grandiflora
Cagra.1372s0011
I
0.835
Carubv10001247m.g
Capsella rubella
Carubv10001247m.g
I
0.835
Bo9g003700
Brassica oleracea
Bo9g003700
I
0.833
Bra037382
Brassica rapa
Bra037382
I
0.833
Thhalv10028761m.g
Eutrema salsugineum
Thhalv10028761m.g
I
0.833
GBF2
Arabidopsis lyrata
Al_scaffold_0006_3899
I
0.832
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
0.832
BGIOSGA001085
Oryza indica
BGIOSGA001085
I
0.831
BGIOSGA020389
Oryza indica
BGIOSGA020389
I
0.831
BRADI2G15940
Brachypodium distachyon
BRADI2G15940
I
0.831
GRMZM2G117851
Zea mays
GRMZM2G117851
I
0.831
LPERR01G21580
Leersia perrieri
LPERR01G21580
I
0.831
LPERR05G21930
Leersia perrieri
LPERR05G21930
I
0.831
OB01G34490
Oryza brachyantha
OB01G34490
I
0.831
OB05G33790
Oryza brachyantha
OB05G33790
I
0.831
OBART01G25300
Oryza barthii
OBART01G25300
I
0.831
OBART05G26280
Oryza barthii
OBART05G26280
I
0.831
OGLUM01G29060
Oryza glumaepatula
OGLUM01G29060
I
0.831
OGLUM05G27920
Oryza glumaepatula
OGLUM05G27920
I
0.831
OLONG_003667
Oryza longistaminata
OLONG_003667
I
0.831
OLONG_022047
Oryza longistaminata
OLONG_022047
I
0.831
OMERI01G23000
Oryza meridionalis
OMERI01G23000
I
0.831
OMERI03G30340
Oryza meridionalis
OMERI03G30340
I
0.831
ONIVA01G28540
Oryza nivara
ONIVA01G28540
I
0.831
ONIVA05G28290
Oryza nivara
ONIVA05G28290
I
0.831
OPUNC01G25140
Oryza punctata
OPUNC01G25140
I
0.831
OPUNC05G23850
Oryza punctata
OPUNC05G23850
I
0.831
ORGLA01G0206000
Oryza glaberrima
ORGLA01G0206000
I
0.831
ORGLA05G0227800
Oryza glaberrima
ORGLA05G0227800
I
0.831
ORUFI01G28110
Oryza rufipogon
ORUFI01G28110
I
0.831
ORUFI05G28170
Oryza rufipogon
ORUFI05G28170
I
0.831
OS01G0658900
Oryza sativa
OS01G0658900
I
0.831
OS05G0569300
Oryza sativa
OS05G0569300
I
0.831
Q40645_ORYSA
Oryza sativa
Q40645_ORYSA
D
0.831
Si001929m.g
Setaria italica
Si001929m.g
I
0.831
mgf003302m
Mimulus guttatus
mgf003302m
I
0.831
mgf013423m
Mimulus guttatus
mgf013423m
I
0.831
GLYMA16G03190
Glycine max
GLYMA16G03190
I
0.830
GRMZM2G011932
Zea mays
GRMZM2G011932
I
0.830
GRMZM2G160136
Zea mays
GRMZM2G160136
I
0.830
GRMZM2G358701
Zea mays
GRMZM2G358701
I
0.830
GRMZM5G848942
Zea mays
GRMZM5G848942
I
0.830
GSMUA_Achr6G32000_001
Musa acuminata
GSMUA_Achr6G32000_001
I
0.830
Sb09g028990
Sorghum bicolor
Sb09g028990
I
0.830
Si022388m.g
Setaria italica
Si022388m.g
I
0.830
Q41109_PHAVU
Phaseolus vulgaris
Q41109_PHAVU
D
0.830
cassava43569.valid.m1
Manihot esculenta
cassava43569.valid.m1
I
0.830
cassava43570.valid.m1
Manihot esculenta
cassava43570.valid.m1
I
0.830
cassava43571.valid.m1
Manihot esculenta
cassava43571.valid.m1
I
0.830
cassava46468.m1
Manihot esculenta
cassava46468.m1
I
0.830
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
0.830
BRADI2G45567
Brachypodium distachyon
BRADI2G45567
I
0.829
GLYMA07G06620
Glycine max
GLYMA07G06620
I
0.829
Sb03g030050
Sorghum bicolor
Sb03g030050
I
0.829
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.828
F775_07803
Aegilops tauschii
F775_07803
I
0.827
GSMUA_Achr9G05310_001
Musa acuminata
GSMUA_Achr9G05310_001
I
0.827
MLOC_6711
Hordeum vulgare
MLOC_6711
I
0.827
Traes_1AL_F18EC96DF
Triticum aestivum
Traes_1AL_F18EC96DF
I
0.827
Traes_1BL_C5FEAF06E
Triticum aestivum
Traes_1BL_C5FEAF06E
I
0.827
Traes_1DL_23D036A85
Triticum aestivum
Traes_1DL_23D036A85
I
0.827
TRIUR3_18341
Triticum urartu
TRIUR3_18341
I
0.827
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
0.826
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
0.826
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
0.826
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
0.826
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
0.826
PK09653.1
Cannabis sativa
PK09653.1
D
0.826
30174.m008698
Ricinus communis
30174.m008698
I
0.825
TAF1_TOBAC
Nicotiana tabacum
TAF1_TOBAC
D
0.824
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
0.824
PDK_20s1349941g001
Phoenix dactylifera
PDK_20s1349941g001
I
0.824
PRUPE_ppa006173mg
Prunus persica
PRUPE_ppa006173mg
I
0.823
Pm018422
Prunus mume
Pm018422
I
0.823
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
0.822
Ca_01293
Cicer arietinum
Ca_01293
I
0.822
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
0.822
MDP0000138052
Malus domestica
MDP0000138052
I
0.822
MDP0000493795
Malus domestica
MDP0000493795
I
0.822
MDP0000545420
Malus domestica
MDP0000545420
I
0.822
POPTR_0002s16870
Populus trichocarpa
POPTR_0002s16870
I
0.820
POPTR_0014s08990
Populus trichocarpa
POPTR_0014s08990
I
0.820
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
0.819
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
0.818
GBF2
Arabidopsis thaliana
AT4G01120
D
0.816
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
0.816
PGSC0003DMG400000088
Solanum tuberosum
PGSC0003DMG400000088
I
0.815
Solyc01g095460.2
Solanum lycopersicum
Solyc01g095460.2
I
0.815
gene32022-v1.0-hybrid
Fragaria vesca
gene32022-v1.0-hybrid
I
0.814
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.813
VIT_15s0046g01440
Vitis vinifera
VIT_15s0046g01440
I
0.812
Ciclev10020314m.g
Citrus clementina
Ciclev10020314m.g
I
0.812
MDP0000239688
Malus domestica
MDP0000239688
I
0.812
orange1.1g014660m.g
Citrus sinensis
orange1.1g014660m.g
I
0.812
GBF1
Arabidopsis thaliana
AT4G36730
D
0.811
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
0.811
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
0.811
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
0.811
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
0.811
estExt_fgenesh2_pg.C_Chr_020452
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_020452
I
0.811
Pavir.Ca00968
Panicum virgatum
Pavir.Ca00968
I
0.811
estExt_fgenesh1_pg.C_10522
Micromonas pusilla
estExt_fgenesh1_pg.C_10522
I
0.809
GBF3
Arabidopsis thaliana
AT2G46270
D
0.808
Bo4g010410
Brassica oleracea
Bo4g010410
I
0.808
Bra004550
Brassica rapa
Bra004550
I
0.808
GBF3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4002338
I
0.808
PRUPE_ppa020524mg
Prunus persica
PRUPE_ppa020524mg
I
0.808
Pm024103
Prunus mume
Pm024103
I
0.808
Cagra.0050s0071
Capsella grandiflora
Cagra.0050s0071
I
0.808
Carubv10023434m.g
Capsella rubella
Carubv10023434m.g
I
0.808
Thhalv10001533m.g
Eutrema salsugineum
Thhalv10001533m.g
I
0.808
PGSC0003DMG400033876
Solanum tuberosum
PGSC0003DMG400033876
I
0.805
Solyc05g050220.2
Solanum lycopersicum
Solyc05g050220.2
I
0.805
Cla014415
Citrullus lanatus
Cla014415
I
0.805
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.805
Pavir.J01411
Panicum virgatum
Pavir.J01411
I
0.805
Cla021500
Citrullus lanatus
Cla021500
I
0.804
Cucsa.258940
Cucumis sativus
Cucsa.258940
I
0.804
PK07494.1
Cannabis sativa
PK07494.1
I
0.804
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.803
Gorai.007G205700
Gossypium raimondii
Gorai.007G205700
I
0.803
Gorai.008G068900
Gossypium raimondii
Gorai.008G068900
I
0.803
Bra005335
Brassica rapa
Bra005335
I
0.802
POPTR_0005s12750
Populus trichocarpa
POPTR_0005s12750
I
0.802
POPTR_0007s12460
Populus trichocarpa
POPTR_0007s12460
I
0.802
GLYMA02G06550
Glycine max
GLYMA02G06550
I
0.801
GLYMA16G25600
Glycine max
GLYMA16G25600
I
0.801
MTR_8g077950
Medicago truncatula
MTR_8g077950
I
0.801
Bra010572
Brassica rapa
Bra010572
I
0.799
PGSC0003DMG400012660
Solanum tuberosum
PGSC0003DMG400012660
I
0.799
Solyc02g085610.2
Solanum lycopersicum
Solyc02g085610.2
I
0.799
MDP0000231274
Malus domestica
MDP0000231274
I
0.799
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
0.799
Ca_17787
Cicer arietinum
Ca_17787
I
0.798
SapurV1A.0255s0070
Salix purpurea
SapurV1A.0255s0070
I
0.798
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
0.797
Thhalv10016740m.g
Eutrema salsugineum
Thhalv10016740m.g
I
0.797
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.796
CPRF3_PETCR
Petroselinum crispum
CPRF3_PETCR
D
0.796
Ciclev10025963m.g
Citrus clementina
Ciclev10025963m.g
I
0.796
Eucgr.H01256
Eucalyptus grandis
Eucgr.H01256
I
0.796
orange1.1g018605m.g
Citrus sinensis
orange1.1g018605m.g
I
0.796
PRUPE_ppa006484mg
Prunus persica
PRUPE_ppa006484mg
I
0.795
PRUPE_ppa008024mg
Prunus persica
PRUPE_ppa008024mg
I
0.795
VIT_18s0001g12120
Vitis vinifera
VIT_18s0001g12120
I
0.795
Pm023132
Prunus mume
Pm023132
I
0.795
Pm026586
Prunus mume
Pm026586
I
0.795
gene32024-v1.0-hybrid
Fragaria vesca
gene32024-v1.0-hybrid
I
0.795
gene13716-v1.0-hybrid
Fragaria vesca
gene13716-v1.0-hybrid
I
0.794
MDP0000185553
Malus domestica
MDP0000185553
I
0.794
MDP0000286846
Malus domestica
MDP0000286846
I
0.794
mgf000639m
Mimulus guttatus
mgf000639m
I
0.793
mgf005151m
Mimulus guttatus
mgf005151m
I
0.793
mgf014804m
Mimulus guttatus
mgf014804m
I
0.793
29646.m001068
Ricinus communis
29646.m001068
I
0.792
cassava45491.m1
Manihot esculenta
cassava45491.m1
I
0.792
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
0.792
gw1.33.173.1
Physcomitrella patens
gw1.33.173.1
I
0.791
mgf008605m
Mimulus guttatus
mgf008605m
I
0.791
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
0.791
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
0.791
Bo1g005460
Brassica oleracea
Bo1g005460
I
0.790
Bra011701
Brassica rapa
Bra011701
I
0.790
SELMODRAFT_135978
Selaginella moellendorffii
SELMODRAFT_135978
I
0.789
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.787
Solyc02g062950.2
Solanum lycopersicum
Solyc02g062950.2
I
0.787
evm.TU.supercontig_158.7
Carica papaya
evm.TU.supercontig_158.7
I
0.785
Gorai.004G181900
Gossypium raimondii
Gorai.004G181900
I
0.785
AMTR_s00158p00056990
Amborella trichopoda
AMTR_s00158p00056990
I
0.784
TCM_000436
Theobroma cacao
TCM_000436
I
0.784
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.783
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.783
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
0.783
BZIP68
Arabidopsis thaliana
AT1G32150
D
0.782
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
0.782
OPUNC02G01690
Oryza punctata
OPUNC02G01690
I
0.782
Ca_15839
Cicer arietinum
Ca_15839
I
0.782
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
0.782
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
0.782
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
0.782