CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG402023696
(
Solanum tuberosum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
PGSC0003DMG402023696
T066544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.788
0.683
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.788
0.683
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.788
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400060926
bZIP
145
204
DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQGKYISNMADQS
Links
Other
bZIP
family TFs
Other
Solanum tuberosum
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF16356
Drosophila ananassae
FBgn0093377
N
CG42675
Drosophila melanogaster
FBgn0261561
N
GM10844
Drosophila sechellia
FBgn0165790
N
L798_07963
Zootermopsis nevadensis
L798_07963
N