POPTR_0004s21360 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0004s21360 T066949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.788 0.940
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.788 0.940
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.788 0.940
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s21360.1 bZIP 185 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I 0.806
MTR_4g053250 Medicago truncatula MTR_4g053250 I 0.804
PGSC0003DMG402023696 Solanum tuberosum PGSC0003DMG402023696 I 0.804
Solyc10g080770.1 Solanum lycopersicum Solyc10g080770.1 I 0.804
Aquca_004_00127 Aquilegia coerulea Aquca_004_00127 I 0.804
Cucsa.199800 Cucumis sativus Cucsa.199800 I 0.800
Aquca_072_00138 Aquilegia coerulea Aquca_072_00138 I 0.799
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I 0.796
30055.m001550 Ricinus communis 30055.m001550 I 0.796
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I 0.796
Cucsa.365420 Cucumis sativus Cucsa.365420 N 0.796
Lus10034296.g Linum usitatissimum Lus10034296.g I 0.796
Lus10041475.g Linum usitatissimum Lus10041475.g I 0.796
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I 0.796
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I 0.793
GLYMA11G19026 Glycine max GLYMA11G19026 I 0.793
GLYMA12G09430 Glycine max GLYMA12G09430 I 0.793
MTR_2g086420 Medicago truncatula MTR_2g086420 I 0.793
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I 0.793
TCM_041421 Theobroma cacao TCM_041421 I 0.793
TGA9 Vitis vinifera VIT_06s0080g00360 I 0.793
Ca_07057 Cicer arietinum Ca_07057 I 0.793
Ca_16486 Cicer arietinum Ca_16486 N 0.793
Cla008794 Citrullus lanatus Cla008794 I 0.793
Pm001317 Prunus mume Pm001317 I 0.793
mgf001395m Mimulus guttatus mgf001395m I 0.793
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I 0.793
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I 0.793
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I 0.793
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I 0.793
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N 0.793
PK07387.1 Cannabis sativa PK07387.1 I 0.793
F775_05299 Aegilops tauschii F775_05299 N 0.790
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N 0.790
MLOC_17690 Hordeum vulgare MLOC_17690 N 0.790
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I 0.790
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I 0.790
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I 0.790
Sb04g006500 Sorghum bicolor Sb04g006500 I 0.790
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I 0.790
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N 0.790
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N 0.790
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N 0.790
Pm029028 Prunus mume Pm029028 I 0.790
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I 0.790
MDP0000145555 Malus domestica MDP0000145555 I 0.790
MDP0000250967 Malus domestica MDP0000250967 I 0.790
MDP0000301884 Malus domestica MDP0000301884 I 0.790
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I 0.790
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I 0.790
PK08582.1 Cannabis sativa PK08582.1 I 0.790
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I 0.789
TGA9 Arabidopsis thaliana AT1G08320 D 0.788
Bo5g008940 Brassica oleracea Bo5g008940 I 0.788
Bo8g112540 Brassica oleracea Bo8g112540 I 0.788
Bra018634 Brassica rapa Bra018634 I 0.788
Bra031622 Brassica rapa Bra031622 I 0.788
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.788
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.788
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.788
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.788
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.788
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.788
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N 0.786
BGIOSGA007726 Oryza indica BGIOSGA007726 I 0.785
OBART02G07230 Oryza barthii OBART02G07230 I 0.785
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I 0.785
OLONG_010393 Oryza longistaminata OLONG_010393 I 0.785
OMERI02G08300 Oryza meridionalis OMERI02G08300 I 0.785
ONIVA02G08860 Oryza nivara ONIVA02G08860 I 0.785
OPUNC02G06400 Oryza punctata OPUNC02G06400 I 0.785
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I 0.785
OS02G0194900 Oryza sativa OS02G0194900 I 0.785
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I 0.784
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I 0.784
Pavir.J04905 Panicum virgatum Pavir.J04905 I 0.784
Pavir.J27823 Panicum virgatum Pavir.J27823 I 0.784
cassava13449.valid.m1 Manihot esculenta cassava13449.valid.m1 N 0.783
Pavir.Ea03760 Panicum virgatum Pavir.Ea03760 N 0.782