POPTR_0014s11590 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0014s11590 T067006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.798 0.645
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.798 0.645
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s11590.1 bZIP 21 82

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004659 Ricinus communis 30076.m004659 I 0.875
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.873
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.873
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.873
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.848
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.848
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.843
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.836
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.833
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.827
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I 0.824
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.824
30131.m007078 Ricinus communis 30131.m007078 I 0.820
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.820
MDP0000205823 Malus domestica MDP0000205823 I 0.819
TCM_004807 Theobroma cacao TCM_004807 I 0.815
PK03779.1 Cannabis sativa PK03779.1 I 0.815
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.814
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.814
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.814
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.813
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.813
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.813
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.813
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.813
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.810
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.810
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.810
MDP0000239026 Malus domestica MDP0000239026 I 0.807
Ca_03512 Cicer arietinum Ca_03512 I 0.806
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.806
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.806
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.806
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.805
MDP0000234798 Malus domestica MDP0000234798 I 0.805
MDP0000949327 Malus domestica MDP0000949327 I 0.805
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.800
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.800
PK07533.1 Cannabis sativa PK07533.1 I 0.800
BZIP53 Arabidopsis thaliana AT3G62420 D 0.798
Bo6g079450 Brassica oleracea Bo6g079450 I 0.798
Bo8g097830 Brassica oleracea Bo8g097830 I 0.798
Bra003500 Brassica rapa Bra003500 I 0.798
Bra007679 Brassica rapa Bra007679 I 0.798
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.798
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.798
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.798
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.798
mgf018581m Mimulus guttatus mgf018581m I 0.797
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.796
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.796
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.796
Cla016841 Citrullus lanatus Cla016841 I 0.795
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.794
Ca_01004 Cicer arietinum Ca_01004 I 0.793
MDP0000437680 Malus domestica MDP0000437680 I 0.792
mgf003466m Mimulus guttatus mgf003466m I 0.791
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.788
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.786
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.784