POPTR_0016s04970 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0016s04970 T067012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.786 0.880
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.786 0.860
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.786 0.860
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.786 0.860
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.786 0.860
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.786 0.860
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.786 0.860
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.786 0.860
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.786 0.860
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.786 0.860
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.786 0.860
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.786 0.860
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.786 0.860
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.786 0.840
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s04970.1 bZIP 64 113

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s05770 Populus trichocarpa POPTR_0006s05770 I 0.799
cassava39253.m1 Manihot esculenta cassava39253.m1 I 0.799
cassava39733.m1 Manihot esculenta cassava39733.m1 I 0.799
LPERR05G17110 Leersia perrieri LPERR05G17110 I 0.790
OBART05G21230 Oryza barthii OBART05G21230 I 0.790
OGLUM05G22440 Oryza glumaepatula OGLUM05G22440 I 0.790
OLONG_003165 Oryza longistaminata OLONG_003165 I 0.790
ONIVA05G21900 Oryza nivara ONIVA05G21900 I 0.790
OPUNC05G18920 Oryza punctata OPUNC05G18920 I 0.790
OS05G0492000 Oryza sativa OS05G0492000 I 0.790
VIT_18s0001g04470 Vitis vinifera VIT_18s0001g04470 I 0.790
Cla017796 Citrullus lanatus Cla017796 I 0.789
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.789
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.789
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.789
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.789
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.787
Pm025995 Prunus mume Pm025995 I 0.787
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.787
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.787
MDP0000307943 Malus domestica MDP0000307943 I 0.787
MDP0000320322 Malus domestica MDP0000320322 I 0.787
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.787
TGA6 Arabidopsis thaliana AT3G12250 D 0.786
TGA2 Arabidopsis thaliana AT5G06950 D 0.786
TGA5 Arabidopsis thaliana AT5G06960 D 0.786
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.786
Bo1g139470 Brassica oleracea Bo1g139470 I 0.786
Bo2g007460 Brassica oleracea Bo2g007460 I 0.786
Bo3g064830 Brassica oleracea Bo3g064830 I 0.786
Bo5g133550 Brassica oleracea Bo5g133550 I 0.786
Bo9g175710 Brassica oleracea Bo9g175710 I 0.786
Bra001443 Brassica rapa Bra001443 I 0.786
Bra009241 Brassica rapa Bra009241 I 0.786
Bra028713 Brassica rapa Bra028713 I 0.786
Bra034767 Brassica rapa Bra034767 I 0.786
Bra038705 Brassica rapa Bra038705 I 0.786
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.786
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.786
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.786
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.786
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.786
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.786
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.786
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.786
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.786
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.786
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.786
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.786
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.786
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.786
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.786
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.786
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.786
OB01G21470 Oryza brachyantha OB01G21470 I 0.786
OBART01G11380 Oryza barthii OBART01G11380 I 0.786
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.786
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.786
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.786
TGA2.3 Oryza sativa OS01G0279900 I 0.786
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.786
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.786
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.786
PAN Populus trichocarpa POPTR_0008s11710 I 0.786
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.786
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.786
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.786
Si002195m.g Setaria italica Si002195m.g I 0.786
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.786
TCM_011845 Theobroma cacao TCM_011845 I 0.786
TCM_023491 Theobroma cacao TCM_023491 I 0.786
TCM_023492 Theobroma cacao TCM_023492 I 0.786
TCM_024862 Theobroma cacao TCM_024862 I 0.786
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.786
PAN Vitis vinifera VIT_01s0011g03230 I 0.786
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.786
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.786
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.786
Ca_07170 Cicer arietinum Ca_07170 I 0.786
Ca_10901 Cicer arietinum Ca_10901 I 0.786
Ca_17971 Cicer arietinum Ca_17971 I 0.786
Cla002918 Citrullus lanatus Cla002918 I 0.786
Cla010092 Citrullus lanatus Cla010092 I 0.786
Cla022393 Citrullus lanatus Cla022393 I 0.786
Pm016643 Prunus mume Pm016643 I 0.786
Pm028917 Prunus mume Pm028917 I 0.786
29216.m000249 Ricinus communis 29216.m000249 I 0.786
30131.m007163 Ricinus communis 30131.m007163 I 0.786
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.786
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.786
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.786
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.786
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.786
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.786
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.786
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.786
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.786
mgf005858m Mimulus guttatus mgf005858m I 0.786
mgf025345m Mimulus guttatus mgf025345m I 0.786
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.786
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.786
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.786
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.786
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.786
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.786
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.786
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.786
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.786
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.786
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.786
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.786
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.786
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.786
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.786
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.786
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.786
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.786
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.786
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.786
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.786
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.786
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.786
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.786
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.786
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.786
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.786
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.786
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.786
MDP0000262210 Malus domestica MDP0000262210 I 0.786
MDP0000300532 Malus domestica MDP0000300532 I 0.786
MDP0000320524 Malus domestica MDP0000320524 I 0.786
MDP0000536881 Malus domestica MDP0000536881 I 0.786
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.786
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.786
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.786
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.786
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.786
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.786
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.786
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.786
PK09021.1 Cannabis sativa PK09021.1 D 0.786
PK13754.1 Cannabis sativa PK13754.1 I 0.786
PK21698.1 Cannabis sativa PK21698.1 I 0.786
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.786
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.783
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.782
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.782
OB01G43330 Oryza brachyantha OB01G43330 I 0.782
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.782
Si001292m.g Setaria italica Si001292m.g I 0.782
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I 0.782
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.782