CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.273.32.1
(
Branchiostoma floridae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
e_gw.273.32.1
T070745_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.794
0.578
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.794
0.578
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.794
0.578
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.794
0.578
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.794
0.578
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.794
0.578
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.794
0.578
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.794
0.578
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.794
0.578
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.791
0.672
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.791
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.273.32.1
bZIP
64
128
LKDDKYWERRKKNNVAAKRSRDARRIKENQVALRASFLEKENATLKEELLKAKEENVILSKKLLK
Links
Other
bZIP
family TFs
Other
Branchiostoma floridae
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
FOMPIDRAFT_1127908
Fomitopsis pinicola
FOMPIDRAFT_1127908
N
GLOTRDRAFT_137651
Gloeophyllum trabeum
GLOTRDRAFT_137651
N
gw1.1.790.1
Sporobolomyces roseus
gw1.1.790.1
N
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
MVLG_05637
Microbotryum violaceum
MVLG_05637
N
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
RHTO_04446
Rhodosporidium toruloides
RHTO_04446
N
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I