Ciclev10022730m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10022730m.g T071643_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.792 0.629
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.792 0.629
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10022730m bZIP 22 83

Links

Other bZIP family TFs
Other Citrus clementina TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.885
30076.m004659 Ricinus communis 30076.m004659 I 0.837
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.835
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.835
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.835
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.824
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.819
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.817
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.817
MDP0000234798 Malus domestica MDP0000234798 I 0.817
MDP0000949327 Malus domestica MDP0000949327 I 0.817
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.815
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.814
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.814
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.810
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.810
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.806
PK03779.1 Cannabis sativa PK03779.1 I 0.805
MDP0000437680 Malus domestica MDP0000437680 I 0.803
Ca_03512 Cicer arietinum Ca_03512 I 0.794
BZIP53 Arabidopsis thaliana AT3G62420 D 0.792
Bo6g079450 Brassica oleracea Bo6g079450 I 0.792
Bo8g097830 Brassica oleracea Bo8g097830 I 0.792
Bra003500 Brassica rapa Bra003500 I 0.792
Bra007679 Brassica rapa Bra007679 I 0.792
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.792
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.792
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.792
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.792
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.791
30131.m007078 Ricinus communis 30131.m007078 I 0.789
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.789
MDP0000205823 Malus domestica MDP0000205823 I 0.787
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.783
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.782
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.782
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.782
TCM_004807 Theobroma cacao TCM_004807 I 0.782
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.782
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.782