Ciclev10028428m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10028428m.g T071650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.791 0.961
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.791 0.961
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.791 0.961
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.786 0.882
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.786 0.882
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.786 0.882
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.786 0.882
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.786 0.863
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.786 0.863
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.786 0.863
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.786 0.863
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.786 0.863
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.786 0.863
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.786 0.863
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.786 0.863
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.786 0.863
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.786 0.843
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10028428m bZIP 143 193

Links

Other bZIP family TFs
Other Citrus clementina TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g036039m.g Citrus sinensis orange1.1g036039m.g I 0.808
AMTR_s00022p00217850 Amborella trichopoda AMTR_s00022p00217850 I 0.807
MTR_0126s0080 Medicago truncatula MTR_0126s0080 I 0.807
SELMODRAFT_231344 Selaginella moellendorffii SELMODRAFT_231344 I 0.807
GLYMA02G30220 Glycine max GLYMA02G30220 I 0.802
GLYMA10G11985 Glycine max GLYMA10G11985 I 0.802
GLYMA12G30990 Glycine max GLYMA12G30990 I 0.802
GSMUA_AchrUn_randomG12130_001 Musa acuminata GSMUA_AchrUn_randomG12130_001 I 0.799
Ca_07292 Cicer arietinum Ca_07292 N 0.798
OB05G28710 Oryza brachyantha OB05G28710 N 0.792
TGA9 Arabidopsis thaliana AT1G08320 D 0.791
Bo5g008940 Brassica oleracea Bo5g008940 I 0.791
Bo8g112540 Brassica oleracea Bo8g112540 I 0.791
Bra018634 Brassica rapa Bra018634 I 0.791
Bra031622 Brassica rapa Bra031622 I 0.791
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.791
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.791
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.791
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.791
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.791
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.791
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I 0.790
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I 0.790
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I 0.790
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I 0.790
Pm029028 Prunus mume Pm029028 I 0.790
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I 0.790
MDP0000145555 Malus domestica MDP0000145555 I 0.790
MDP0000250967 Malus domestica MDP0000250967 I 0.790
MDP0000301884 Malus domestica MDP0000301884 I 0.790
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I 0.790
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I 0.790
PK08582.1 Cannabis sativa PK08582.1 I 0.790
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.788
SELMODRAFT_231160 Selaginella moellendorffii SELMODRAFT_231160 N 0.788
Pm025995 Prunus mume Pm025995 I 0.788
estExt_gwp_gw1.C_1260170 Physcomitrella patens estExt_gwp_gw1.C_1260170 N 0.788
fgenesh1_pg.scaffold_30000177 Physcomitrella patens fgenesh1_pg.scaffold_30000177 N 0.788
fgenesh1_pm.scaffold_257000017 Physcomitrella patens fgenesh1_pm.scaffold_257000017 N 0.788
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.788
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I 0.788
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.788
MDP0000307943 Malus domestica MDP0000307943 I 0.788
MDP0000320322 Malus domestica MDP0000320322 I 0.788
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.788
TCM_024862 Theobroma cacao TCM_024862 I 0.787
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.787
Cla017796 Citrullus lanatus Cla017796 I 0.787
29216.m000249 Ricinus communis 29216.m000249 I 0.787
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.787
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.787
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.787
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.787
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.787
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.787
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.787
PK21698.1 Cannabis sativa PK21698.1 I 0.787
AMTR_s00010p00030830 Amborella trichopoda AMTR_s00010p00030830 I 0.786
AMTR_s00095p00059370 Amborella trichopoda AMTR_s00095p00059370 I 0.786
TGA6 Arabidopsis thaliana AT3G12250 D 0.786
TGA2 Arabidopsis thaliana AT5G06950 D 0.786
TGA5 Arabidopsis thaliana AT5G06960 D 0.786
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.786
Bo1g139470 Brassica oleracea Bo1g139470 I 0.786
Bo2g007460 Brassica oleracea Bo2g007460 I 0.786
Bo3g064830 Brassica oleracea Bo3g064830 I 0.786
Bo5g133550 Brassica oleracea Bo5g133550 I 0.786
Bo9g175710 Brassica oleracea Bo9g175710 I 0.786
Bra001443 Brassica rapa Bra001443 I 0.786
Bra009241 Brassica rapa Bra009241 I 0.786
Bra028713 Brassica rapa Bra028713 I 0.786
Bra034767 Brassica rapa Bra034767 I 0.786
Bra038705 Brassica rapa Bra038705 I 0.786
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.786
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.786
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.786
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.786
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.786
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.786
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.786
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.786
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.786
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.786
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.786
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.786
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.786
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I 0.786
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.786
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.786
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.786
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.786
OB01G21470 Oryza brachyantha OB01G21470 I 0.786
OBART01G11380 Oryza barthii OBART01G11380 I 0.786
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.786
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.786
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.786
TGA2.3 Oryza sativa OS01G0279900 I 0.786
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.786
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.786
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.786
PAN Populus trichocarpa POPTR_0008s11710 I 0.786
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.786
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.786
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.786
Si002195m.g Setaria italica Si002195m.g I 0.786
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.786
TCM_011845 Theobroma cacao TCM_011845 I 0.786
TCM_023491 Theobroma cacao TCM_023491 I 0.786
TCM_023492 Theobroma cacao TCM_023492 I 0.786
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.786
PAN Vitis vinifera VIT_01s0011g03230 I 0.786
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.786
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.786
Ca_07170 Cicer arietinum Ca_07170 I 0.786
Ca_10901 Cicer arietinum Ca_10901 I 0.786
Ca_17971 Cicer arietinum Ca_17971 I 0.786
Cla002918 Citrullus lanatus Cla002918 I 0.786
Cla010092 Citrullus lanatus Cla010092 I 0.786
Cla022393 Citrullus lanatus Cla022393 I 0.786
Pm016643 Prunus mume Pm016643 I 0.786
Pm028917 Prunus mume Pm028917 I 0.786
30131.m007163 Ricinus communis 30131.m007163 I 0.786
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.786
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.786
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.786
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.786
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.786
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.786
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.786
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.786
mgf005858m Mimulus guttatus mgf005858m I 0.786
mgf025345m Mimulus guttatus mgf025345m I 0.786
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.786
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.786
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.786
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.786
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.786
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.786
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.786
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.786
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.786
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.786
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.786
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.786
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.786
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.786
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.786
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.786
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.786
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.786
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.786
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.786
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.786
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.786
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.786
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.786
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.786
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.786
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.786
MDP0000262210 Malus domestica MDP0000262210 I 0.786
MDP0000300532 Malus domestica MDP0000300532 I 0.786
MDP0000320524 Malus domestica MDP0000320524 I 0.786
MDP0000536881 Malus domestica MDP0000536881 I 0.786
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.786
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.786
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.786
Pavir.J04905 Panicum virgatum Pavir.J04905 I 0.786
Pavir.J27823 Panicum virgatum Pavir.J27823 I 0.786
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.786
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.786
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.786
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.786
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.786
PK09021.1 Cannabis sativa PK09021.1 D 0.786
PK13754.1 Cannabis sativa PK13754.1 I 0.786
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.786
BGIOSGA007726 Oryza indica BGIOSGA007726 I 0.785
OBART02G07230 Oryza barthii OBART02G07230 I 0.785
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I 0.785
OLONG_010393 Oryza longistaminata OLONG_010393 I 0.785
OMERI02G08300 Oryza meridionalis OMERI02G08300 I 0.785
ONIVA02G08860 Oryza nivara ONIVA02G08860 I 0.785
OPUNC02G06400 Oryza punctata OPUNC02G06400 I 0.785
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I 0.785
OS02G0194900 Oryza sativa OS02G0194900 I 0.785
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.784
BGIOSGA000451 Oryza indica BGIOSGA000451 I 0.783
BRADI2G55567 Brachypodium distachyon BRADI2G55567 I 0.783
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.783
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.783
LPERR01G32640 Leersia perrieri LPERR01G32640 I 0.783
MLOC_65998 Hordeum vulgare MLOC_65998 I 0.783
OB01G43330 Oryza brachyantha OB01G43330 I 0.783
OB01G46780 Oryza brachyantha OB01G46780 I 0.783
OBART01G38000 Oryza barthii OBART01G38000 I 0.783
OGLUM01G42170 Oryza glumaepatula OGLUM01G42170 I 0.783
OLONG_014543 Oryza longistaminata OLONG_014543 I 0.783
OMERI01G34960 Oryza meridionalis OMERI01G34960 I 0.783
ONIVA04G25750 Oryza nivara ONIVA04G25750 I 0.783
OPUNC01G36830 Oryza punctata OPUNC01G36830 I 0.783
ORGLA01G0318100 Oryza glaberrima ORGLA01G0318100 I 0.783
ORUFI01G41330 Oryza rufipogon ORUFI01G41330 I 0.783
LG2 Oryza sativa OS01G0859500 I 0.783
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.783
Si001292m.g Setaria italica Si001292m.g I 0.783
Traes_3AL_C5E13251D Triticum aestivum Traes_3AL_C5E13251D I 0.783
TRAES3BF099600030CFD_g Triticum aestivum TRAES3BF099600030CFD_g I 0.783
Traes_3DL_4A4D552B2 Triticum aestivum Traes_3DL_4A4D552B2 I 0.783
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I 0.783
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.783