CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10024848.g
(
Linum usitatissimum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Lus10024848.g
T072074_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.794
0.641
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10024848
bZIP
239
302
VKRSRRCKTMLSNRESARRSRRRKQDQLNELESQAGQLRDERTTLLSRLTDVNHKCDEASVDNR
Links
Other
bZIP
family TFs
Other
Linum usitatissimum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29598.m000468
Ricinus communis
29598.m000468
I
0.783
Bo4g119810
Brassica oleracea
Bo4g119810
I
0.782
Bra000102
Brassica rapa
Bra000102
I
0.796
Bra014802
Brassica rapa
Bra014802
I
0.782
Ca_03753
Cicer arietinum
Ca_03753
I
0.794
Cla015037
Citrullus lanatus
Cla015037
I
0.804
Cla020112
Citrullus lanatus
Cla020112
I
0.792
Cucsa.133290
Cucumis sativus
Cucsa.133290
I
0.792
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
0.804
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.792
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
0.794
GSMUA_Achr7G07650_001
Musa acuminata
GSMUA_Achr7G07650_001
I
0.811
gw1.213.115.1
Physcomitrella patens
gw1.213.115.1
I
0.789
Lus10006590.g
Linum usitatissimum
Lus10006590.g
I
0.796
Lus10015913.g
Linum usitatissimum
Lus10015913.g
I
0.788
Lus10018759.g
Linum usitatissimum
Lus10018759.g
I
0.864
Lus10024847.g
Linum usitatissimum
Lus10024847.g
I
0.889
mgf009803m
Mimulus guttatus
mgf009803m
I
0.783
PK05128.1
Cannabis sativa
PK05128.1
D
0.794
PK11472.1
Cannabis sativa
PK11472.1
I
0.802
Pm020231
Prunus mume
Pm020231
I
0.799
PRUPE_ppa005367mg
Prunus persica
PRUPE_ppa005367mg
I
0.799
ATBZIP25
Arabidopsis lyrata
scaffold_502576.1
N
0.794