CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000305387
(
Malus domestica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
MDP0000305387
T072197_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.835
0.984
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.835
0.952
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.821
0.903
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.821
0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.820
0.919
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.820
0.919
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.820
0.919
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000305387
bZIP
246
307
DPKRAKRILANRQSAARSKERKARYMQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENT
Links
Other
bZIP
family TFs
Other
Malus domestica
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_31774
Aegilops tauschii
F775_31774
I
0.787
F775_32183
Aegilops tauschii
F775_32183
I
0.850
AMTR_s00077p00070990
Amborella trichopoda
AMTR_s00077p00070990
I
0.835
Aquca_004_00525
Aquilegia coerulea
Aquca_004_00525
I
0.835
Aquca_045_00222
Aquilegia coerulea
Aquca_045_00222
I
0.821
AtbZIP52
Arabidopsis lyrata
Al_scaffold_0001_623
I
0.821
fgenesh2_kg.4__2179__AT2G40620.1
Arabidopsis lyrata
fgenesh2_kg.4__2179__AT2G40620.1
I
0.820
AtbZIP52
Arabidopsis thaliana
AT1G06850
D
0.821
BZIP18
Arabidopsis thaliana
AT2G40620
D
0.820
Bostr.25219s0275
Boechera stricta
Bostr.25219s0275
I
0.821
Bostr.9345s0072
Boechera stricta
Bostr.9345s0072
I
0.820
BRADI1G63170
Brachypodium distachyon
BRADI1G63170
N
0.792
Bo4g012700
Brassica oleracea
Bo4g012700
I
0.820
Bo4g190320
Brassica oleracea
Bo4g190320
I
0.820
Bo8g007220
Brassica oleracea
Bo8g007220
I
0.821
Bo8g114410
Brassica oleracea
Bo8g114410
I
0.821
Bra004582
Brassica rapa
Bra004582
I
0.820
Bra016980
Brassica rapa
Bra016980
I
0.820
Bra030663
Brassica rapa
Bra030663
I
0.821
Bra031541
Brassica rapa
Bra031541
I
0.821
PK00315.1
Cannabis sativa
PK00315.1
D
0.835
PK16335.1
Cannabis sativa
PK16335.1
D
0.835
Cagra.1642s0027
Capsella grandiflora
Cagra.1642s0027
I
0.820
Cagra.1671s0308
Capsella grandiflora
Cagra.1671s0308
I
0.821
Carubv10009673m.g
Capsella rubella
Carubv10009673m.g
I
0.821
Carubv10025182m.g
Capsella rubella
Carubv10025182m.g
I
0.820
evm.TU.supercontig_19.62
Carica papaya
evm.TU.supercontig_19.62
I
0.808
evm.TU.supercontig_2.298
Carica papaya
evm.TU.supercontig_2.298
I
0.835
Ca_04108
Cicer arietinum
Ca_04108
I
0.797
Ca_08929
Cicer arietinum
Ca_08929
I
0.835
Ca_15657
Cicer arietinum
Ca_15657
I
0.835
Cla007409
Citrullus lanatus
Cla007409
I
0.835
Cla013626
Citrullus lanatus
Cla013626
I
0.835
Ciclev10032076m.g
Citrus clementina
Ciclev10032076m.g
I
0.835
orange1.1g020026m.g
Citrus sinensis
orange1.1g020026m.g
I
0.835
Cucsa.118900
Cucumis sativus
Cucsa.118900
I
0.835
Cucsa.143950
Cucumis sativus
Cucsa.143950
I
0.835
Eucgr.G03135
Eucalyptus grandis
Eucgr.G03135
I
0.821
Eucgr.J00119
Eucalyptus grandis
Eucgr.J00119
I
0.821
Thhalv10008146m.g
Eutrema salsugineum
Thhalv10008146m.g
I
0.821
Thhalv10016819m.g
Eutrema salsugineum
Thhalv10016819m.g
I
0.820
gene21344-v1.0-hybrid
Fragaria vesca
gene21344-v1.0-hybrid
I
0.835
gene28103-v1.0-hybrid
Fragaria vesca
gene28103-v1.0-hybrid
I
0.821
GLYMA02G40270
Glycine max
GLYMA02G40270
I
0.835
GLYMA11G30940
Glycine max
GLYMA11G30940
I
0.835
GLYMA14G38460
Glycine max
GLYMA14G38460
I
0.835
GLYMA18G05880
Glycine max
GLYMA18G05880
I
0.835
Gorai.009G293600
Gossypium raimondii
Gorai.009G293600
I
0.808
Gorai.010G218700
Gossypium raimondii
Gorai.010G218700
I
0.807
Gorai.011G209200
Gossypium raimondii
Gorai.011G209200
I
0.808
MLOC_44311
Hordeum vulgare
MLOC_44311
I
0.835
MLOC_51623
Hordeum vulgare
MLOC_51623
I
0.783
MLOC_60045
Hordeum vulgare
MLOC_60045
I
0.850
LPERR03G14390
Leersia perrieri
LPERR03G14390
I
0.835
Lus10008605.g
Linum usitatissimum
Lus10008605.g
I
0.835
Lus10009907.g
Linum usitatissimum
Lus10009907.g
I
0.835
Lus10012881.g
Linum usitatissimum
Lus10012881.g
I
0.808
Lus10030531.g
Linum usitatissimum
Lus10030531.g
I
0.808
Lus10042211.g
Linum usitatissimum
Lus10042211.g
I
0.835
LjSGA_023972.1
Lotus japonicus
LjSGA_023972.1
I
0.787
MDP0000129203
Malus domestica
MDP0000129203
I
0.835
MDP0000210251
Malus domestica
MDP0000210251
I
0.835
MDP0000297791
Malus domestica
MDP0000297791
I
0.850
cassava43674.valid.m1
Manihot esculenta
cassava43674.valid.m1
I
0.822
MTR_3g094020
Medicago truncatula
MTR_3g094020
I
0.797
MTR_3g467120
Medicago truncatula
MTR_3g467120
I
0.835
MTR_5g075390
Medicago truncatula
MTR_5g075390
I
0.835
mgf007830m
Mimulus guttatus
mgf007830m
I
0.850
GSMUA_Achr11G23650_001
Musa acuminata
GSMUA_Achr11G23650_001
I
0.796
GSMUA_Achr2G18830_001
Musa acuminata
GSMUA_Achr2G18830_001
I
0.835
GSMUA_Achr5G29650_001
Musa acuminata
GSMUA_Achr5G29650_001
I
0.782
GSMUA_AchrUn_randomG14020_001
Musa acuminata
GSMUA_AchrUn_randomG14020_001
I
0.804
OBART07G26390
Oryza barthii
OBART07G26390
I
0.835
OGLUM07G26420
Oryza glumaepatula
OGLUM07G26420
I
0.835
BGIOSGA012577
Oryza indica
BGIOSGA012577
I
0.835
BGIOSGA023710
Oryza indica
BGIOSGA023710
I
0.835
OMERI03G14760
Oryza meridionalis
OMERI03G14760
I
0.835
ONIVA03G17500
Oryza nivara
ONIVA03G17500
I
0.835
ONIVA07G26100
Oryza nivara
ONIVA07G26100
I
0.835
OPUNC03G15960
Oryza punctata
OPUNC03G15960
I
0.835
OPUNC07G24840
Oryza punctata
OPUNC07G24840
I
0.835
ORUFI03G17050
Oryza rufipogon
ORUFI03G17050
I
0.835
RF2B
Oryza sativa
OS03G0336200
I
0.835
Pavir.Bb03755
Panicum virgatum
Pavir.Bb03755
I
0.822
Pavir.Ib01574
Panicum virgatum
Pavir.Ib01574
I
0.835
PDK_20s1367981g001
Phoenix dactylifera
PDK_20s1367981g001
I
0.787
POPTR_0013s09350
Populus trichocarpa
POPTR_0013s09350
I
0.808
POPTR_0013s15280
Populus trichocarpa
POPTR_0013s15280
I
0.834
POPTR_0019s15040
Populus trichocarpa
POPTR_0019s15040
I
0.835
Pm000251
Prunus mume
Pm000251
I
0.835
Pm019060
Prunus mume
Pm019060
I
0.835
PRUPE_ppa006097mg
Prunus persica
PRUPE_ppa006097mg
I
0.835
PRUPE_ppa007645mg
Prunus persica
PRUPE_ppa007645mg
I
0.835
29729.m002363
Ricinus communis
29729.m002363
I
0.808
29804.m001495
Ricinus communis
29804.m001495
I
0.835
SapurV1A.0182s0020
Salix purpurea
SapurV1A.0182s0020
I
0.792
SapurV1A.0215s0230
Salix purpurea
SapurV1A.0215s0230
I
0.835
SapurV1A.3480s0020
Salix purpurea
SapurV1A.3480s0020
I
0.835
SapurV1A.4004s0010
Salix purpurea
SapurV1A.4004s0010
I
0.792
Si030224m.g
Setaria italica
Si030224m.g
I
0.822
Si036380m.g
Setaria italica
Si036380m.g
I
0.835
Solyc06g048630.2
Solanum lycopersicum
Solyc06g048630.2
I
0.821
PGSC0003DMG400016651
Solanum tuberosum
PGSC0003DMG400016651
I
0.821
PGSC0003DMG400027599
Solanum tuberosum
PGSC0003DMG400027599
I
0.821
TCM_042286
Theobroma cacao
TCM_042286
I
0.835
TCM_045524
Theobroma cacao
TCM_045524
I
0.822
Traes_2BS_1B0F27580
Triticum aestivum
Traes_2BS_1B0F27580
I
0.833
Traes_2DS_93EAEC654
Triticum aestivum
Traes_2DS_93EAEC654
I
0.835
Traes_4AS_45B416B25
Triticum aestivum
Traes_4AS_45B416B25
I
0.850
Traes_4BL_9422485B3
Triticum aestivum
Traes_4BL_9422485B3
I
0.850
Traes_4DL_19DC0CA31
Triticum aestivum
Traes_4DL_19DC0CA31
I
0.850
AtbZIP52
Vitis vinifera
VIT_06s0004g08070
I
0.835
VIT_13s0067g02900
Vitis vinifera
VIT_13s0067g02900
I
0.821
GRMZM2G062391
Zea mays
GRMZM2G062391
I
0.850
GRMZM2G151295
Zea mays
GRMZM2G151295
I
0.835