CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g011345m.g
(
Citrus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
orange1.1g011345m.g
T072242_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G19490
M09904_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT1G19490_01
0.855
0.781
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g011345m
bZIP
131
194
EKEERRVCRILANRESARQTIRRRQALCEELTRKAADLSQENESLKREKELAVKEYQSLETINK
Links
Other
bZIP
family TFs
Other
Citrus sinensis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28779.m000140
Ricinus communis
28779.m000140
I
0.840
Aquca_027_00443
Aquilegia coerulea
Aquca_027_00443
I
0.803
AT1G19490
Arabidopsis thaliana
AT1G19490
D
0.855
Bo5g027510
Brassica oleracea
Bo5g027510
I
0.855
Bostr.7128s0552
Boechera stricta
Bostr.7128s0552
I
0.846
Bra025743
Brassica rapa
Bra025743
I
0.855
Cagra.1961s0053
Capsella grandiflora
Cagra.1961s0053
I
0.846
Carubv10011417m.g
Capsella rubella
Carubv10011417m.g
I
0.846
cassava31755.valid.m1
Manihot esculenta
cassava31755.valid.m1
I
0.790
Ciclev10013541m.g
Citrus clementina
Ciclev10013541m.g
I
0.884
Cla017983
Citrullus lanatus
Cla017983
I
0.847
Cucsa.240980
Cucumis sativus
Cucsa.240980
I
0.847
evm.TU.supercontig_5.51
Carica papaya
evm.TU.supercontig_5.51
I
0.843
gene30252-v1.0-hybrid
Fragaria vesca
gene30252-v1.0-hybrid
I
0.859
GLYMA03G35101
Glycine max
GLYMA03G35101
I
0.833
GLYMA19G37801
Glycine max
GLYMA19G37801
I
0.837
Gorai.009G405400
Gossypium raimondii
Gorai.009G405400
I
0.833
Lus10003255.g
Linum usitatissimum
Lus10003255.g
I
0.846
Lus10035597.g
Linum usitatissimum
Lus10035597.g
I
0.809
MDP0000147745
Malus domestica
MDP0000147745
I
0.783
MTR_7g104190
Medicago truncatula
MTR_7g104190
I
0.796
PK09783.1
Cannabis sativa
PK09783.1
I
0.833
POPTR_0006s11550
Populus trichocarpa
POPTR_0006s11550
I
0.857
PRUPE_ppa003901mg
Prunus persica
PRUPE_ppa003901mg
I
0.847
SapurV1A.0208s0130
Salix purpurea
SapurV1A.0208s0130
I
0.857
TCM_022516
Theobroma cacao
TCM_022516
I
0.847
Thhalv10009681m.g
Eutrema salsugineum
Thhalv10009681m.g
I
0.855
VIT_08s0007g03640
Vitis vinifera
VIT_08s0007g03640
I
0.836