CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J00689
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.J00689
T072433_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J00689.1.p
bZIP
94
156
DDERKNIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRQCKQLQVEMAALIQPSS
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G29920
Brachypodium distachyon
BRADI1G29920
N
0.843
BRADI3G60870
Brachypodium distachyon
BRADI3G60870
N
0.800
MLOC_14243
Hordeum vulgare
MLOC_14243
N
0.839
LPERR02G31960
Leersia perrieri
LPERR02G31960
N
0.862
OBART02G38520
Oryza barthii
OBART02G38520
N
0.830
OB02G45490
Oryza brachyantha
OB02G45490
N
0.862
ORGLA02G0337900
Oryza glaberrima
ORGLA02G0337900
N
0.830
ORGLA06G0234600
Oryza glaberrima
ORGLA06G0234600
N
0.820
OGLUM02G39710
Oryza glumaepatula
OGLUM02G39710
N
0.801
BGIOSGA005293
Oryza indica
BGIOSGA005293
N
0.830
OLONG_006885
Oryza longistaminata
OLONG_006885
N
0.782
OMERI02G36320
Oryza meridionalis
OMERI02G36320
N
0.830
ONIVA02G41380
Oryza nivara
ONIVA02G41380
N
0.830
OPUNC02G35740
Oryza punctata
OPUNC02G35740
N
0.830
OPUNC06G25350
Oryza punctata
OPUNC06G25350
N
0.820
ORUFI02G40230
Oryza rufipogon
ORUFI02G40230
N
0.830
OS06G0719500
Oryza sativa
OS06G0719500
N
0.820
OS06G0724000
Oryza sativa
OS06G0724000
N
0.820
OS06G0720900
Oryza sativa
OS06G0720900
N
0.820
OS02G0833600
Oryza sativa
OS02G0833600
N
0.830
Pavir.J01346
Panicum virgatum
Pavir.J01346
N
0.849
Pavir.J04759
Panicum virgatum
Pavir.J04759
N
0.849
Si007412m.g
Setaria italica
Si007412m.g
N
0.849
Si023448m.g
Setaria italica
Si023448m.g
N
0.860
Sb04g038600
Sorghum bicolor
Sb04g038600
N
0.852
Sb10g030400
Sorghum bicolor
Sb10g030400
N
0.849
Traes_7AL_3ED7A9663
Triticum aestivum
Traes_7AL_3ED7A9663
N
0.787
Traes_7DL_EECCC4DBF
Triticum aestivum
Traes_7DL_EECCC4DBF
N
0.810
GRMZM2G402862
Zea mays
GRMZM2G402862
N
0.839
GRMZM2G073892
Zea mays
GRMZM2G073892
N
0.848