CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J04422
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.J04422
T072440_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J04422.1.p
bZIP
45
93
GEKALRRLAQNREAARKSRLRKKAYIEQLENSRLKLAQLEQELQRARQQ
Pavir.J04422.2.p
bZIP
45
93
GEKALRRLAQNREAARKSRLRKKAYIEQLENSRLKLAQLEQELQRARQQ
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J05186
Panicum virgatum
Pavir.J05186
N
0.795
Si022626m.g
Setaria italica
Si022626m.g
N
0.793
GRMZM2G080731
Zea mays
GRMZM2G080731
N
0.784
Sb10g009592
Sorghum bicolor
Sb10g009592
N
0.784
PGSC0003DMG400027562
Solanum tuberosum
PGSC0003DMG400027562
N
0.782
Lus10031349.g
Linum usitatissimum
Lus10031349.g
N
0.782