CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK07494.1
(
Cannabis sativa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PK07494.1
T072871_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.814
0.688
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.803
0.594
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.802
0.656
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.796
0.641
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.796
0.688
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.796
0.688
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.796
0.688
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.791
0.578
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.791
0.578
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.791
0.578
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.791
0.578
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.791
0.578
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.790
0.578
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.790
0.578
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.785
0.688
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.785
0.688
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.783
0.578
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.783
0.578
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK07494.1
bZIP
133
196
ERLLKRERRKQANRESARRSRMRKQAEYEELVRRWDSLNMENNALKSELGQLKGDSEKLRLENA
Links
Other
bZIP
family TFs
Other
Cannabis sativa
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa020524mg
Prunus persica
PRUPE_ppa020524mg
I
0.879
Pm024103
Prunus mume
Pm024103
I
0.879
MDP0000239688
Malus domestica
MDP0000239688
I
0.874
VIT_02s0025g01020
Vitis vinifera
VIT_02s0025g01020
I
0.841
Aquca_037_00034
Aquilegia coerulea
Aquca_037_00034
I
0.839
Lus10003034.g
Linum usitatissimum
Lus10003034.g
I
0.835
Lus10005146.g
Linum usitatissimum
Lus10005146.g
I
0.835
SapurV1A.0013s0770
Salix purpurea
SapurV1A.0013s0770
I
0.834
gene32022-v1.0-hybrid
Fragaria vesca
gene32022-v1.0-hybrid
I
0.833
MTR_7g116890
Medicago truncatula
MTR_7g116890
I
0.823
MTR_8g070820
Medicago truncatula
MTR_8g070820
I
0.823
Ca_01293
Cicer arietinum
Ca_01293
I
0.823
GLYMA03G41590
Glycine max
GLYMA03G41590
I
0.819
GLYMA19G44190
Glycine max
GLYMA19G44190
I
0.819
Eucgr.E00078
Eucalyptus grandis
Eucgr.E00078
I
0.818
PDK_20s1349941g001
Phoenix dactylifera
PDK_20s1349941g001
I
0.818
cassava29861.valid.m1
Manihot esculenta
cassava29861.valid.m1
I
0.816
cassava29862.valid.m1
Manihot esculenta
cassava29862.valid.m1
I
0.816
gene18928-v1.0-hybrid
Fragaria vesca
gene18928-v1.0-hybrid
I
0.816
gene32024-v1.0-hybrid
Fragaria vesca
gene32024-v1.0-hybrid
I
0.815
POPTR_0002s16870
Populus trichocarpa
POPTR_0002s16870
I
0.814
cassava43569.valid.m1
Manihot esculenta
cassava43569.valid.m1
I
0.814
cassava43570.valid.m1
Manihot esculenta
cassava43570.valid.m1
I
0.814
cassava43571.valid.m1
Manihot esculenta
cassava43571.valid.m1
I
0.814
cassava46468.m1
Manihot esculenta
cassava46468.m1
I
0.814
Gorai.007G105100
Gossypium raimondii
Gorai.007G105100
I
0.814
PK09653.1
Cannabis sativa
PK09653.1
D
0.814
30174.m008698
Ricinus communis
30174.m008698
I
0.813
Aquca_013_00209
Aquilegia coerulea
Aquca_013_00209
I
0.806
F775_07803
Aegilops tauschii
F775_07803
I
0.805
MLOC_6711
Hordeum vulgare
MLOC_6711
I
0.805
Sb09g028990
Sorghum bicolor
Sb09g028990
I
0.805
Si022388m.g
Setaria italica
Si022388m.g
I
0.805
Traes_1AL_F18EC96DF
Triticum aestivum
Traes_1AL_F18EC96DF
I
0.805
Traes_1BL_C5FEAF06E
Triticum aestivum
Traes_1BL_C5FEAF06E
I
0.805
Traes_1DL_23D036A85
Triticum aestivum
Traes_1DL_23D036A85
I
0.805
TRIUR3_18341
Triticum urartu
TRIUR3_18341
I
0.805
VIT_15s0046g01440
Vitis vinifera
VIT_15s0046g01440
I
0.805
chr1.CM0579.280.nd
Lotus japonicus
chr1.CM0579.280.nd
I
0.805
GSMUA_Achr1G05050_001
Musa acuminata
GSMUA_Achr1G05050_001
I
0.804
PRUPE_ppa006173mg
Prunus persica
PRUPE_ppa006173mg
I
0.804
Pm018422
Prunus mume
Pm018422
I
0.804
MDP0000138052
Malus domestica
MDP0000138052
I
0.804
MDP0000493795
Malus domestica
MDP0000493795
I
0.804
MDP0000545420
Malus domestica
MDP0000545420
I
0.804
BGIOSGA001085
Oryza indica
BGIOSGA001085
I
0.803
GLYMA16G15810
Glycine max
GLYMA16G15810
I
0.803
GRMZM2G117851
Zea mays
GRMZM2G117851
I
0.803
GSMUA_Achr5G14150_001
Musa acuminata
GSMUA_Achr5G14150_001
I
0.803
LPERR01G21580
Leersia perrieri
LPERR01G21580
I
0.803
LPERR05G21930
Leersia perrieri
LPERR05G21930
I
0.803
OB01G34490
Oryza brachyantha
OB01G34490
I
0.803
OB05G33790
Oryza brachyantha
OB05G33790
I
0.803
OBART01G25300
Oryza barthii
OBART01G25300
I
0.803
OBART05G26280
Oryza barthii
OBART05G26280
I
0.803
OGLUM01G29060
Oryza glumaepatula
OGLUM01G29060
I
0.803
OGLUM05G27920
Oryza glumaepatula
OGLUM05G27920
I
0.803
OLONG_003667
Oryza longistaminata
OLONG_003667
I
0.803
OLONG_022047
Oryza longistaminata
OLONG_022047
I
0.803
OMERI01G23000
Oryza meridionalis
OMERI01G23000
I
0.803
OMERI03G30340
Oryza meridionalis
OMERI03G30340
I
0.803
ONIVA01G28540
Oryza nivara
ONIVA01G28540
I
0.803
OPUNC01G25140
Oryza punctata
OPUNC01G25140
I
0.803
ORGLA01G0206000
Oryza glaberrima
ORGLA01G0206000
I
0.803
ORGLA05G0227800
Oryza glaberrima
ORGLA05G0227800
I
0.803
ORUFI01G28110
Oryza rufipogon
ORUFI01G28110
I
0.803
ORUFI05G28170
Oryza rufipogon
ORUFI05G28170
I
0.803
OS01G0658900
Oryza sativa
OS01G0658900
I
0.803
OS05G0569300
Oryza sativa
OS05G0569300
I
0.803
Q40645_ORYSA
Oryza sativa
Q40645_ORYSA
D
0.803
Sb03g030050
Sorghum bicolor
Sb03g030050
I
0.803
Si001929m.g
Setaria italica
Si001929m.g
I
0.803
Pavir.Ea02315
Panicum virgatum
Pavir.Ea02315
I
0.803
BRADI2G45567
Brachypodium distachyon
BRADI2G45567
I
0.802
GLYMA16G03190
Glycine max
GLYMA16G03190
I
0.802
Q41109_PHAVU
Phaseolus vulgaris
Q41109_PHAVU
D
0.802
BRADI2G15940
Brachypodium distachyon
BRADI2G15940
I
0.801
GLYMA07G06620
Glycine max
GLYMA07G06620
I
0.801
PGSC0003DMG400033876
Solanum tuberosum
PGSC0003DMG400033876
I
0.800
Solyc05g050220.2
Solanum lycopersicum
Solyc05g050220.2
I
0.800
GLYMA08G34280
Glycine max
GLYMA08G34280
I
0.799
GSMUA_Achr4G18980_001
Musa acuminata
GSMUA_Achr4G18980_001
I
0.799
TCM_005210
Theobroma cacao
TCM_005210
I
0.799
Gorai.004G153100
Gossypium raimondii
Gorai.004G153100
I
0.799
Gorai.008G123200
Gossypium raimondii
Gorai.008G123200
I
0.799
GRMZM2G011932
Zea mays
GRMZM2G011932
I
0.798
GRMZM2G160136
Zea mays
GRMZM2G160136
I
0.798
GRMZM2G358701
Zea mays
GRMZM2G358701
I
0.798
GRMZM5G848942
Zea mays
GRMZM5G848942
I
0.798
Aquca_002_01218
Aquilegia coerulea
Aquca_002_01218
I
0.798
GBF3
Arabidopsis thaliana
AT2G46270
D
0.796
GBF2
Arabidopsis thaliana
AT4G01120
D
0.796
BGIOSGA020389
Oryza indica
BGIOSGA020389
I
0.796
Bo4g010410
Brassica oleracea
Bo4g010410
I
0.796
Bra004550
Brassica rapa
Bra004550
I
0.796
GBF3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4002338
I
0.796
ONIVA05G28290
Oryza nivara
ONIVA05G28290
I
0.796
OPUNC05G23850
Oryza punctata
OPUNC05G23850
I
0.796
Cagra.0050s0071
Capsella grandiflora
Cagra.0050s0071
I
0.796
Carubv10023434m.g
Capsella rubella
Carubv10023434m.g
I
0.796
Thhalv10001533m.g
Eutrema salsugineum
Thhalv10001533m.g
I
0.796
Bo4g038560
Brassica oleracea
Bo4g038560
I
0.795
GSMUA_Achr9G05310_001
Musa acuminata
GSMUA_Achr9G05310_001
I
0.795
GBF2
Arabidopsis lyrata
Al_scaffold_0006_3899
I
0.792
Bo9g003700
Brassica oleracea
Bo9g003700
I
0.792
Bra037382
Brassica rapa
Bra037382
I
0.792
Ciclev10020314m.g
Citrus clementina
Ciclev10020314m.g
I
0.792
orange1.1g014660m.g
Citrus sinensis
orange1.1g014660m.g
I
0.792
Thhalv10028761m.g
Eutrema salsugineum
Thhalv10028761m.g
I
0.792
GBF1
Arabidopsis thaliana
AT4G36730
D
0.791
Bra005335
Brassica rapa
Bra005335
I
0.791
Bra010572
Brassica rapa
Bra010572
I
0.791
GSMUA_Achr4G04530_001
Musa acuminata
GSMUA_Achr4G04530_001
I
0.791
GBF1
Arabidopsis lyrata
scaffold_700433.1
I
0.791
Cla021500
Citrullus lanatus
Cla021500
I
0.791
Cucsa.258940
Cucumis sativus
Cucsa.258940
I
0.791
Bostr.7867s1529
Boechera stricta
Bostr.7867s1529
I
0.791
Cagra.5996s0003
Capsella grandiflora
Cagra.5996s0003
I
0.791
Carubv10005287m.g
Capsella rubella
Carubv10005287m.g
I
0.791
Thhalv10025733m.g
Eutrema salsugineum
Thhalv10025733m.g
I
0.791
AMTR_s00059p00094730
Amborella trichopoda
AMTR_s00059p00094730
I
0.790
BZIP68
Arabidopsis thaliana
AT1G32150
D
0.790
bZIP68
Arabidopsis lyrata
fgenesh2_kg.1__3350__AT1G32150.1
I
0.790
Ca_15839
Cicer arietinum
Ca_15839
I
0.790
Cagra.3359s0011
Capsella grandiflora
Cagra.3359s0011
I
0.790
Thhalv10007879m.g
Eutrema salsugineum
Thhalv10007879m.g
I
0.790
Cla014415
Citrullus lanatus
Cla014415
I
0.789
Cucsa.104970
Cucumis sativus
Cucsa.104970
I
0.789
Bostr.7365s0064
Boechera stricta
Bostr.7365s0064
I
0.789
Cagra.1372s0011
Capsella grandiflora
Cagra.1372s0011
I
0.789
Carubv10001247m.g
Capsella rubella
Carubv10001247m.g
I
0.789
GBF1
Vitis vinifera
VIT_04s0023g01360
I
0.788
SapurV1A.0817s0110
Salix purpurea
SapurV1A.0817s0110
I
0.788
GSMUA_Achr6G32000_001
Musa acuminata
GSMUA_Achr6G32000_001
I
0.787
Lus10014324.g
Linum usitatissimum
Lus10014324.g
I
0.787
Lus10026033.g
Linum usitatissimum
Lus10026033.g
I
0.787
Pavir.Ca00968
Panicum virgatum
Pavir.Ca00968
I
0.787
Bostr.3359s0141
Boechera stricta
Bostr.3359s0141
I
0.786
TAF1_TOBAC
Nicotiana tabacum
TAF1_TOBAC
D
0.785
mgf003302m
Mimulus guttatus
mgf003302m
I
0.785
mgf013423m
Mimulus guttatus
mgf013423m
I
0.785
Pavir.J01411
Panicum virgatum
Pavir.J01411
I
0.785
PDK_20s1708971g001
Phoenix dactylifera
PDK_20s1708971g001
I
0.785
GSMUA_Achr4G11610_001
Musa acuminata
GSMUA_Achr4G11610_001
I
0.784
BZIP16
Arabidopsis thaliana
AT2G35530
D
0.783
Bostr.23794s0549
Boechera stricta
Bostr.23794s0549
I
0.783
Cagra.0993s0063
Capsella grandiflora
Cagra.0993s0063
I
0.783
Bo1g005460
Brassica oleracea
Bo1g005460
I
0.782
Bra011701
Brassica rapa
Bra011701
I
0.782