CpipJ_CPIJ007837 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ007837 T077588_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.762 0.841
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.762 0.841
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.762 0.841
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.762 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007837-RA C2H2 ZF 234 256
CpipJ_CPIJ007837-RA C2H2 ZF 262 286
CpipJ_CPIJ007837-RA C2H2 ZF 292 318

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ007837 Culex quinquefasciatus CPIJ007837 I 0.827
ADAC002711 Anopheles darlingi ADAC002711 I 0.808
AGAP006736 Anopheles gambiae AGAP006736 I 0.808
AATE006128 Anopheles atroparvus AATE006128 I 0.808
ACHR008006 Anopheles christyi ACHR008006 I 0.808
ACOM031780 Anopheles coluzzii ACOM031780 I 0.808
ACUA015638 Anopheles culicifacies ACUA015638 I 0.808
AFAF008408 Anopheles farauti AFAF008408 I 0.808
AFUN008843 Anopheles funestus AFUN008843 I 0.808
AMEC019224 Anopheles melas AMEC019224 I 0.808
AMEM008834 Anopheles merus AMEM008834 I 0.808
ASIS020148 Anopheles sinensis ASIS020148 I 0.808
MESCA001237 Megaselia scalaris MESCA001237 I 0.804
SINV25327 Solenopsis invicta SINV25327 I 0.788
ENSAMEG00000002010 Ailuropoda melanoleuca ENSAMEG00000002010 I 0.762
ENSAMXG00000011871 Astyanax mexicanus ENSAMXG00000011871 I 0.762
GLIS2 Bos taurus ENSBTAG00000009199 I 0.762
GLIS2 Canis familiaris ENSCAFG00000019227 I 0.762
GLIS2 Callithrix jacchus ENSCJAG00000019770 I 0.762
ENSCSAG00000009593 Chlorocebus sabaeus ENSCSAG00000009593 I 0.762
GLIS2 Dasypus novemcinctus ENSDNOG00000010899 I 0.762
ENSDORG00000014886 Dipodomys ordii ENSDORG00000014886 I 0.762
GLIS2 Equus caballus ENSECAG00000020639 I 0.762
GLIS2 Erinaceus europaeus ENSEEUG00000007346 I 0.762
GLIS2 Echinops telfairi ENSETEG00000006418 I 0.762
GLIS2 Felis catus ENSFCAG00000011229 I 0.762
GLIS2 Homo sapiens ENSG00000126603 D 0.762
GLIS2 Gorilla gorilla ENSGGOG00000004717 I 0.762
GLIS2 Loxodonta africana ENSLAFG00000018480 I 0.762
GLIS2 Microcebus murinus ENSMICG00000017817 I 0.762
GLIS2 Myotis lucifugus ENSMLUG00000008930 I 0.762
ENSMPUG00000015020 Mustela putorius furo ENSMPUG00000015020 I 0.762
Glis2 Mus musculus ENSMUSG00000014303 D 0.762
ENSNLEG00000009834 Nomascus leucogenys ENSNLEG00000009834 I 0.762
ENSOARG00000003260 Ovis aries ENSOARG00000003260 I 0.762
GLIS2 Oryctolagus cuniculus ENSOCUG00000012971 I 0.762
GLIS2 Otolemur garnettii ENSOGAG00000015200 I 0.762
GLIS2 Ochotona princeps ENSOPRG00000000484 I 0.762
ENSPPYG00000007055 Pongo abelii ENSPPYG00000007055 I 0.762
GLIS2 Pan troglodytes ENSPTRG00000007714 I 0.762
GLIS2 Pteropus vampyrus ENSPVAG00000017802 I 0.762
Glis2 Rattus norvegicus ENSRNOG00000004766 I 0.762
GLIS2 Sus scrofa ENSSSCG00000023653 I 0.762
ENSSTOG00000025049 Ictidomys tridecemlineatus ENSSTOG00000025049 I 0.762
GLIS2 Tursiops truncatus ENSTTRG00000002711 I 0.762
SPU_010542 Strongylocentrotus purpuratus SPU_010542 I 0.762
ENSBTAP00000012119-D1 Bos grunniens ENSBTAP00000012119-D1 I 0.762
Myotis_brandtii_GLIS2_10028036 Myotis brandtii Myotis_brandtii_GLIS2_10028036 I 0.762