CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g081360
(
Brassica oleracea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Bo5g081360
T081752_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g081360.1
C2H2 ZF
68
89
FACRRCGKAFAVKGDWRTHEKN
Bo5g081360.1
C2H2 ZF
88
114
KNCGKLWYCSCGSDFKHKRSLKDHVKA
Links
Other
C2H2 ZF
family TFs
Other
Brassica oleracea
TFs
243 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_11193
Aegilops tauschii
F775_11193
N
0.758
F775_14972
Aegilops tauschii
F775_14972
N
0.787
AMTR_s00022p00243980
Amborella trichopoda
AMTR_s00022p00243980
N
0.761
AMTR_s00093p00164790
Amborella trichopoda
AMTR_s00093p00164790
N
0.776
Aquca_004_00109
Aquilegia coerulea
Aquca_004_00109
N
0.772
Aquca_006_00227
Aquilegia coerulea
Aquca_006_00227
N
0.772
Aquca_040_00077
Aquilegia coerulea
Aquca_040_00077
N
0.772
TT1
Arabidopsis lyrata
fgenesh2_kg.1__3606__AT1G34790.1
N
0.778
NTT
Arabidopsis lyrata
fgenesh2_kg.5__2209__AT3G57670.1
N
0.761
WIP2
Arabidopsis thaliana
AT3G57670
N
0.761
Bostr.1040s0072
Boechera stricta
Bostr.1040s0072
N
0.778
Bostr.20903s0019
Boechera stricta
Bostr.20903s0019
N
0.761
BRADI2G23870
Brachypodium distachyon
BRADI2G23870
N
0.782
BRADI2G55540
Brachypodium distachyon
BRADI2G55540
N
0.758
BRADI3G39820
Brachypodium distachyon
BRADI3G39820
N
0.781
BRADI4G27770
Brachypodium distachyon
BRADI4G27770
N
0.772
BRADI4G33557
Brachypodium distachyon
BRADI4G33557
N
0.787
Bo4g111000
Brassica oleracea
Bo4g111000
N
0.761
Bo5g008880
Brassica oleracea
Bo5g008880
N
0.763
Bo6g073120
Brassica oleracea
Bo6g073120
N
0.761
Bo8g092070
Brassica oleracea
Bo8g092070
N
0.761
Bo8g112550
Brassica oleracea
Bo8g112550
N
0.763
Bra003295
Brassica rapa
Bra003295
N
0.761
Bra007346
Brassica rapa
Bra007346
N
0.760
Bra014612
Brassica rapa
Bra014612
N
0.761
Bra018638
Brassica rapa
Bra018638
N
0.763
Bra031621
Brassica rapa
Bra031621
N
0.763
PK03705.1
Cannabis sativa
PK03705.1
N
0.761
PK05257.1
Cannabis sativa
PK05257.1
N
0.772
Cagra.0210s0004
Capsella grandiflora
Cagra.0210s0004
N
0.761
Cagra.0764s0003
Capsella grandiflora
Cagra.0764s0003
N
0.778
Carubv10012266m.g
Capsella rubella
Carubv10012266m.g
N
0.778
Carubv10017428m.g
Capsella rubella
Carubv10017428m.g
N
0.761
evm.TU.contig_31438
Carica papaya
evm.TU.contig_31438
N
0.781
evm.TU.contig_35924
Carica papaya
evm.TU.contig_35924
N
0.772
evm.TU.supercontig_84.74
Carica papaya
evm.TU.supercontig_84.74
N
0.761
Ca_07051
Cicer arietinum
Ca_07051
N
0.772
Ca_07269
Cicer arietinum
Ca_07269
N
0.761
Ca_16482
Cicer arietinum
Ca_16482
N
0.766
Ca_27078
Cicer arietinum
Ca_27078
N
0.778
Cla000184
Citrullus lanatus
Cla000184
N
0.764
Cla008187
Citrullus lanatus
Cla008187
N
0.761
Cla008675
Citrullus lanatus
Cla008675
N
0.761
Cla015481
Citrullus lanatus
Cla015481
N
0.791
Ciclev10003648m.g
Citrus clementina
Ciclev10003648m.g
N
0.778
Ciclev10005189m.g
Citrus clementina
Ciclev10005189m.g
N
0.761
Ciclev10017716m.g
Citrus clementina
Ciclev10017716m.g
N
0.761
Ciclev10028757m.g
Citrus clementina
Ciclev10028757m.g
N
0.772
orange1.1g019587m.g
Citrus sinensis
orange1.1g019587m.g
N
0.761
orange1.1g037179m.g
Citrus sinensis
orange1.1g037179m.g
N
0.778
orange1.1g037234m.g
Citrus sinensis
orange1.1g037234m.g
N
0.786
orange1.1g039549m.g
Citrus sinensis
orange1.1g039549m.g
N
0.772
orange1.1g040794m.g
Citrus sinensis
orange1.1g040794m.g
N
0.761
Cucsa.050260
Cucumis sativus
Cucsa.050260
N
0.791
Cucsa.065460
Cucumis sativus
Cucsa.065460
N
0.791
Cucsa.199850
Cucumis sativus
Cucsa.199850
N
0.764
Cucsa.242970
Cucumis sativus
Cucsa.242970
N
0.761
Cucsa.357260
Cucumis sativus
Cucsa.357260
N
0.761
Eucgr.A02400
Eucalyptus grandis
Eucgr.A02400
N
0.761
Eucgr.B03047
Eucalyptus grandis
Eucgr.B03047
N
0.776
Eucgr.B03870
Eucalyptus grandis
Eucgr.B03870
N
0.772
Eucgr.F00336
Eucalyptus grandis
Eucgr.F00336
N
0.792
Eucgr.J00788
Eucalyptus grandis
Eucgr.J00788
N
0.758
Eucgr.J01266
Eucalyptus grandis
Eucgr.J01266
N
0.762
Thhalv10006035m.g
Eutrema salsugineum
Thhalv10006035m.g
N
0.761
gene14361-v1.0-hybrid
Fragaria vesca
gene14361-v1.0-hybrid
N
0.761
gene20598-v1.0-hybrid
Fragaria vesca
gene20598-v1.0-hybrid
N
0.761
gene22042-v1.0-hybrid
Fragaria vesca
gene22042-v1.0-hybrid
N
0.778
GLYMA02G31270
Glycine max
GLYMA02G31270
N
0.761
GLYMA08G16390
Glycine max
GLYMA08G16390
N
0.791
GLYMA11G19060
Glycine max
GLYMA11G19060
N
0.772
GLYMA12G09400
Glycine max
GLYMA12G09400
N
0.772
GLYMA12G30930
Glycine max
GLYMA12G30930
N
0.772
GLYMA12G36660
Glycine max
GLYMA12G36660
N
0.791
GLYMA13G01720
Glycine max
GLYMA13G01720
N
0.778
GLYMA13G27371
Glycine max
GLYMA13G27371
N
0.791
GLYMA13G39370
Glycine max
GLYMA13G39370
N
0.772
GLYMA14G35140
Glycine max
GLYMA14G35140
N
0.778
GLYMA15G42870
Glycine max
GLYMA15G42870
N
0.791
GLYMA19G32430
Glycine max
GLYMA19G32430
N
0.761
Gorai.001G121700
Gossypium raimondii
Gorai.001G121700
N
0.772
Gorai.002G152600
Gossypium raimondii
Gorai.002G152600
N
0.761
Gorai.003G089200
Gossypium raimondii
Gorai.003G089200
N
0.761
Gorai.004G037000
Gossypium raimondii
Gorai.004G037000
N
0.791
Gorai.004G065400
Gossypium raimondii
Gorai.004G065400
N
0.791
Gorai.006G111400
Gossypium raimondii
Gorai.006G111400
N
0.772
Gorai.006G138700
Gossypium raimondii
Gorai.006G138700
N
0.761
Gorai.007G177300
Gossypium raimondii
Gorai.007G177300
N
0.791
Gorai.010G039600
Gossypium raimondii
Gorai.010G039600
N
0.778
Gorai.013G250800
Gossypium raimondii
Gorai.013G250800
N
0.758
MLOC_2787
Hordeum vulgare
MLOC_2787
N
0.787
MLOC_54308
Hordeum vulgare
MLOC_54308
N
0.772
LPERR01G32600
Leersia perrieri
LPERR01G32600
N
0.758
LPERR08G16620
Leersia perrieri
LPERR08G16620
N
0.781
LPERR09G03450
Leersia perrieri
LPERR09G03450
N
0.772
LPERR09G10700
Leersia perrieri
LPERR09G10700
N
0.781
Lus10004887.g
Linum usitatissimum
Lus10004887.g
N
0.772
Lus10020597.g
Linum usitatissimum
Lus10020597.g
N
0.772
Lus10029525.g
Linum usitatissimum
Lus10029525.g
N
0.782
Lus10033454.g
Linum usitatissimum
Lus10033454.g
N
0.778
Lus10039613.g
Linum usitatissimum
Lus10039613.g
N
0.782
chr1.CM0318.720.nd
Lotus japonicus
chr1.CM0318.720.nd
N
0.761
chr3.CM1144.10.nc
Lotus japonicus
chr3.CM1144.10.nc
N
0.772
LjSGA_032817.1
Lotus japonicus
LjSGA_032817.1
N
0.802
MDP0000131949
Malus domestica
MDP0000131949
N
0.772
MDP0000142494
Malus domestica
MDP0000142494
N
0.790
MDP0000144266
Malus domestica
MDP0000144266
N
0.792
MDP0000300013
Malus domestica
MDP0000300013
N
0.772
MDP0000403797
Malus domestica
MDP0000403797
N
0.761
MDP0000573922
Malus domestica
MDP0000573922
N
0.775
MDP0000580545
Malus domestica
MDP0000580545
N
0.761
MDP0000601705
Malus domestica
MDP0000601705
N
0.761
cassava13451.valid.m1
Manihot esculenta
cassava13451.valid.m1
N
0.772
cassava16214.m1
Manihot esculenta
cassava16214.m1
N
0.772
cassava35956.valid.m1
Manihot esculenta
cassava35956.valid.m1
N
0.761
cassava39829.m1
Manihot esculenta
cassava39829.m1
N
0.791
cassava41737.m1
Manihot esculenta
cassava41737.m1
N
0.761
cassava44390.m1
Manihot esculenta
cassava44390.m1
N
0.778
mgf019910m
Mimulus guttatus
mgf019910m
N
0.761
mgf022319m
Mimulus guttatus
mgf022319m
N
0.815
mgf022981m
Mimulus guttatus
mgf022981m
N
0.758
GSMUA_Achr3G03850_001
Musa acuminata
GSMUA_Achr3G03850_001
N
0.791
GSMUA_Achr4G01560_001
Musa acuminata
GSMUA_Achr4G01560_001
N
0.782
GSMUA_Achr6G01410_001
Musa acuminata
GSMUA_Achr6G01410_001
N
0.772
GSMUA_Achr9G12600_001
Musa acuminata
GSMUA_Achr9G12600_001
N
0.791
GSMUA_AchrUn_randomG20320_001
Musa acuminata
GSMUA_AchrUn_randomG20320_001
N
0.761
GSMUA_AchrUn_randomG22660_001
Musa acuminata
GSMUA_AchrUn_randomG22660_001
N
0.761
OBART01G37960
Oryza barthii
OBART01G37960
N
0.758
OBART02G07320
Oryza barthii
OBART02G07320
N
0.761
OBART08G19670
Oryza barthii
OBART08G19670
N
0.781
OBART09G03640
Oryza barthii
OBART09G03640
N
0.762
OB05G26090
Oryza brachyantha
OB05G26090
N
0.782
OB08G26650
Oryza brachyantha
OB08G26650
N
0.781
ORGLA01G0317700
Oryza glaberrima
ORGLA01G0317700
N
0.758
ORGLA02G0068500
Oryza glaberrima
ORGLA02G0068500
N
0.761
ORGLA08G0173000
Oryza glaberrima
ORGLA08G0173000
N
0.781
ORGLA09G0111700
Oryza glaberrima
ORGLA09G0111700
N
0.781
ORGLA09G0176200
Oryza glaberrima
ORGLA09G0176200
N
0.762
OGLUM01G42130
Oryza glumaepatula
OGLUM01G42130
N
0.758
OGLUM05G19360
Oryza glumaepatula
OGLUM05G19360
N
0.782
OGLUM08G20830
Oryza glumaepatula
OGLUM08G20830
N
0.781
OGLUM09G04400
Oryza glumaepatula
OGLUM09G04400
N
0.762
OGLUM09G05550
Oryza glumaepatula
OGLUM09G05550
N
0.772
OGLUM09G15150
Oryza glumaepatula
OGLUM09G15150
N
0.781
BGIOSGA000452
Oryza indica
BGIOSGA000452
N
0.758
BGIOSGA030081
Oryza indica
BGIOSGA030081
N
0.762
BGIOSGA030484
Oryza indica
BGIOSGA030484
N
0.772
BGIOSGA031001
Oryza indica
BGIOSGA031001
N
0.781
OMERI01G34920
Oryza meridionalis
OMERI01G34920
N
0.758
OMERI08G16450
Oryza meridionalis
OMERI08G16450
N
0.781
OMERI09G02890
Oryza meridionalis
OMERI09G02890
N
0.762
OMERI09G03940
Oryza meridionalis
OMERI09G03940
N
0.772
OMERI09G11270
Oryza meridionalis
OMERI09G11270
N
0.781
ONIVA02G14580
Oryza nivara
ONIVA02G14580
N
0.762
ONIVA04G25710
Oryza nivara
ONIVA04G25710
N
0.758
ONIVA08G08420
Oryza nivara
ONIVA08G08420
N
0.772
ONIVA08G21960
Oryza nivara
ONIVA08G21960
N
0.781
ONIVA09G15100
Oryza nivara
ONIVA09G15100
N
0.781
OPUNC01G36780
Oryza punctata
OPUNC01G36780
N
0.758
OPUNC08G17810
Oryza punctata
OPUNC08G17810
N
0.781
OPUNC09G03280
Oryza punctata
OPUNC09G03280
N
0.762
OPUNC09G04260
Oryza punctata
OPUNC09G04260
N
0.772
OPUNC09G12930
Oryza punctata
OPUNC09G12930
N
0.781
ORUFI01G41290
Oryza rufipogon
ORUFI01G41290
N
0.758
ORUFI09G04060
Oryza rufipogon
ORUFI09G04060
N
0.762
ORUFI09G05390
Oryza rufipogon
ORUFI09G05390
N
0.772
ORUFI09G15680
Oryza rufipogon
ORUFI09G15680
N
0.781
OS01G0859100
Oryza sativa
OS01G0859100
N
0.758
OS08G0504000
Oryza sativa
OS08G0504000
N
0.781
OS09G0307400
Oryza sativa
OS09G0307400
N
0.772
OS09G0485600
Oryza sativa
OS09G0485600
N
0.781
Pavir.Ba01731
Panicum virgatum
Pavir.Ba01731
N
0.787
Pavir.Ba03009
Panicum virgatum
Pavir.Ba03009
N
0.772
Pavir.Fa00506
Panicum virgatum
Pavir.Fa00506
N
0.781
Pavir.Fb01879
Panicum virgatum
Pavir.Fb01879
N
0.781
Pavir.J11927
Panicum virgatum
Pavir.J11927
N
0.758
POPTR_0001s05630
Populus trichocarpa
POPTR_0001s05630
N
0.762
POPTR_0001s27490
Populus trichocarpa
POPTR_0001s27490
N
0.791
POPTR_0002s09840
Populus trichocarpa
POPTR_0002s09840
N
0.768
POPTR_0004s19460
Populus trichocarpa
POPTR_0004s19460
N
0.772
POPTR_0009s06700
Populus trichocarpa
POPTR_0009s06700
N
0.791
POPTR_0009s14590
Populus trichocarpa
POPTR_0009s14590
N
0.772
POPTR_0016s05310
Populus trichocarpa
POPTR_0016s05310
N
0.761
Pm000471
Prunus mume
Pm000471
N
0.761
Pm001374
Prunus mume
Pm001374
N
0.772
Pm025853
Prunus mume
Pm025853
N
0.761
PRUPE_ppa008185mg
Prunus persica
PRUPE_ppa008185mg
N
0.761
PRUPE_ppa023619mg
Prunus persica
PRUPE_ppa023619mg
N
0.772
PRUPE_ppa024429mg
Prunus persica
PRUPE_ppa024429mg
N
0.761
27810.m000651
Ricinus communis
27810.m000651
N
0.761
29908.m006047
Ricinus communis
29908.m006047
N
0.778
30055.m001542
Ricinus communis
30055.m001542
N
0.772
30061.m000294
Ricinus communis
30061.m000294
N
0.791
SapurV1A.0018s0090
Salix purpurea
SapurV1A.0018s0090
N
0.761
SapurV1A.0027s0280
Salix purpurea
SapurV1A.0027s0280
N
0.772
SapurV1A.0080s0360
Salix purpurea
SapurV1A.0080s0360
N
0.772
SapurV1A.0111s0170
Salix purpurea
SapurV1A.0111s0170
N
0.762
SapurV1A.0219s0040
Salix purpurea
SapurV1A.0219s0040
N
0.772
SapurV1A.0445s0120
Salix purpurea
SapurV1A.0445s0120
N
0.757
SapurV1A.0445s0140
Salix purpurea
SapurV1A.0445s0140
N
0.757
SapurV1A.2210s0020
Salix purpurea
SapurV1A.2210s0020
N
0.762
SELMODRAFT_110681
Selaginella moellendorffii
SELMODRAFT_110681
N
0.758
SELMODRAFT_128378
Selaginella moellendorffii
SELMODRAFT_128378
N
0.758
SELMODRAFT_36986
Selaginella moellendorffii
SELMODRAFT_36986
N
0.758
SELMODRAFT_36987
Selaginella moellendorffii
SELMODRAFT_36987
N
0.758
Si013819m.g
Setaria italica
Si013819m.g
N
0.781
Si022296m.g
Setaria italica
Si022296m.g
N
0.758
Si029897m.g
Setaria italica
Si029897m.g
N
0.787
Si030360m.g
Setaria italica
Si030360m.g
N
0.772
Solyc01g087050.2
Solanum lycopersicum
Solyc01g087050.2
N
0.782
Solyc04g074320.1
Solanum lycopersicum
Solyc04g074320.1
N
0.782
Solyc05g009770.1
Solanum lycopersicum
Solyc05g009770.1
N
0.761
Solyc11g062060.1
Solanum lycopersicum
Solyc11g062060.1
N
0.761
PGSC0003DMG400006808
Solanum tuberosum
PGSC0003DMG400006808
N
0.782
PGSC0003DMG400007112
Solanum tuberosum
PGSC0003DMG400007112
N
0.772
PGSC0003DMG400013609
Solanum tuberosum
PGSC0003DMG400013609
N
0.761
PGSC0003DMG400030271
Solanum tuberosum
PGSC0003DMG400030271
N
0.761
PGSC0003DMG400030803
Solanum tuberosum
PGSC0003DMG400030803
N
0.782
PGSC0003DMG400046144
Solanum tuberosum
PGSC0003DMG400046144
N
0.761
Sb02g020840
Sorghum bicolor
Sb02g020840
N
0.772
Sb02g028220
Sorghum bicolor
Sb02g028220
N
0.787
Sb07g028010
Sorghum bicolor
Sb07g028010
N
0.781
Sb09g021850
Sorghum bicolor
Sb09g021850
N
0.758
TCM_005892
Theobroma cacao
TCM_005892
N
0.791
TCM_024788
Theobroma cacao
TCM_024788
N
0.761
TCM_034881
Theobroma cacao
TCM_034881
N
0.778
TCM_041441
Theobroma cacao
TCM_041441
N
0.772
TRAES3BF099700020CFD_g
Triticum aestivum
TRAES3BF099700020CFD_g
N
0.758
Traes_5BL_46BDE583B
Triticum aestivum
Traes_5BL_46BDE583B
N
0.772
Traes_5BL_6888AE9CB
Triticum aestivum
Traes_5BL_6888AE9CB
N
0.787
Traes_5DL_51643AC9F
Triticum aestivum
Traes_5DL_51643AC9F
N
0.787
Traes_5DL_98FA0887C
Triticum aestivum
Traes_5DL_98FA0887C
N
0.772
Traes_7AS_8054DC45D
Triticum aestivum
Traes_7AS_8054DC45D
N
0.787
TRIUR3_30490
Triticum urartu
TRIUR3_30490
N
0.787
TRIUR3_30537
Triticum urartu
TRIUR3_30537
N
0.772
WIP3
Vitis vinifera
VIT_06s0080g00270
N
0.772
NTT
Vitis vinifera
VIT_08s0007g08070
N
0.761
TT1
Vitis vinifera
VIT_18s0001g05860
N
0.778
GRMZM2G000836
Zea mays
GRMZM2G000836
N
0.782
GRMZM2G071101
Zea mays
GRMZM2G071101
N
0.781
GRMZM2G084014
Zea mays
GRMZM2G084014
N
0.787
GRMZM2G150011
Zea mays
GRMZM2G150011
N
0.772
GRMZM2G445684
Zea mays
GRMZM2G445684
N
0.781