CRE25436 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE25436 T085069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.827 1.000
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.790 0.826
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.790 0.826
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.790 0.826
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.790 0.826
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.790 0.826
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.790 0.826
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.790 0.826
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.790 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE25436 C2H2 ZF 137 159
CRE25436 C2H2 ZF 165 187
CRE25436 C2H2 ZF 193 216

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009162 Calypte anna Aan_R009162 I
Afo_R007438 Aptenodytes forsteri Afo_R007438 I
Alligator_sinensis_CCG009029.1 Alligator sinensis Alligator_sinensis_CCG009029.1 I
Alligator_sinensis_CCG009029.2 Alligator sinensis Alligator_sinensis_CCG009029.2 I
Brh_R009705 Buceros rhinoceros Brh_R009705 I
Cmyd_10008332 Chelonia mydas Cmyd_10008332 I
ENSAMEG00000006742 Ailuropoda melanoleuca ENSAMEG00000006742 I
ENSAMXG00000013845 Astyanax mexicanus ENSAMXG00000013845 I
ENSAPLG00000007702 Anas platyrhynchos ENSAPLG00000007702 I
ENSCSAG00000004149 Chlorocebus sabaeus ENSCSAG00000004149 I
ENSFALG00000002754 Ficedula albicollis ENSFALG00000002754 I
ENSGACG00000012216 Gasterosteus aculeatus ENSGACG00000012216 I
ENSGALG00000000671 Gallus gallus ENSGALG00000000671 D
ENSGMOG00000002563 Gadus morhua ENSGMOG00000002563 I
ENSGMOG00000004594 Gadus morhua ENSGMOG00000004594 I
ENSLACG00000003245 Latimeria chalumnae ENSLACG00000003245 I
ENSLOCG00000003985 Lepisosteus oculatus ENSLOCG00000003985 I
ENSMPUG00000007412 Mustela putorius furo ENSMPUG00000007412 I
ENSNLEG00000005522 Nomascus leucogenys ENSNLEG00000005522 I
ENSOARG00000003591 Ovis aries ENSOARG00000003591 I
ENSONIG00000005943 Oreochromis niloticus ENSONIG00000005943 I
ENSONIG00000014846 Oreochromis niloticus ENSONIG00000014846 I
ENSP00000396538 Macaca fascicularis ENSP00000396538 I
ENSP00000396538-D1 Bos grunniens ENSP00000396538-D1 I
ENSPANG00000009863 Papio anubis ENSPANG00000009863 I
ENSPFOG00000013180 Poecilia formosa ENSPFOG00000013180 I
ENSPFOG00000017540 Poecilia formosa ENSPFOG00000017540 I
ENSPPYG00000007507 Pongo abelii ENSPPYG00000007507 I
ENSPSIG00000011812 Pelodiscus sinensis ENSPSIG00000011812 I
ENSSHAG00000014917 Sarcophilus harrisii ENSSHAG00000014917 I
ENSSTOG00000020478 Ictidomys tridecemlineatus ENSSTOG00000020478 I
ENSTNIG00000009352 Tetraodon nigroviridis ENSTNIG00000009352 I
ENSTSYG00000001907 Tarsius syrichta ENSTSYG00000001907 I
ENSXMAG00000003183 Xiphophorus maculatus ENSXMAG00000003183 I
ENSXMAG00000009207 Xiphophorus maculatus ENSXMAG00000009207 I
e_gw.69.170.1 Branchiostoma floridae e_gw.69.170.1 I
Gfo_R000557 Geospiza fortis Gfo_R000557 I
Myotis_brandtii_NFAT5_10022449 Myotis brandtii Myotis_brandtii_NFAT5_10022449 I
NFAT5 Tupaia belangeri ENSTBEG00000002347 I
NFAT5 Taeniopygia guttata ENSTGUG00000008104 I
NFAT5 Tursiops truncatus ENSTTRG00000010017 I
NFAT5 Sus scrofa ENSSSCG00000002755 I
NFAT5 Vicugna pacos ENSVPAG00000003995 I
nfat5 Xenopus tropicalis XB-GENE-6069990 I
NFAT5 Sorex araneus ENSSARG00000011900 I
NFAT5 Anolis carolinensis ENSACAG00000003530 I
Nfat5 Rattus norvegicus ENSRNOG00000011879 I
NFAT5 Loxodonta africana ENSLAFG00000008964 I
NFAT5 Bos taurus ENSBTAG00000013412 I
NFAT5 Canis familiaris ENSCAFG00000020254 I
NFAT5 Choloepus hoffmanni ENSCHOG00000005255 I
NFAT5 Callithrix jacchus ENSCJAG00000015262 I
NFAT5 Cavia porcellus ENSCPOG00000012425 I
NFAT5 Equus caballus ENSECAG00000010266 I
NFAT5 Erinaceus europaeus ENSEEUG00000001431 I
NFAT5 Felis catus ENSFCAG00000002956 I
NFAT5 Homo sapiens ENSG00000102908 D
NFAT5 Pteropus vampyrus ENSPVAG00000013326 I
NFAT5 Meleagris gallopavo ENSMGAG00000008624 I
NFAT5 Myotis lucifugus ENSMLUG00000006619 I
NFAT5 Monodelphis domestica ENSMODG00000002743 I
NFAT5 Pan troglodytes ENSPTRG00000008283 I
NFAT5 Procavia capensis ENSPCAG00000001059 I
NFAT5 Otolemur garnettii ENSOGAG00000010485 I
NFAT5 Oryctolagus cuniculus ENSOCUG00000004386 I
NFAT5 Ornithorhynchus anatinus ENSOANG00000002367 I
Nfat5 Mus musculus ENSMUSG00000003847 I
NFAT5 Macaca mulatta ENSMMUG00000018255 I
nfat5a Tetraodon nigroviridis ENSTNIG00000012108 I
nfat5a Danio rerio ENSDARG00000020872 I
nfat5a Takifugu rubripes ENSTRUG00000011018 I
nfat5a Oryzias latipes ENSORLG00000010349 I
nfat5b Gasterosteus aculeatus ENSGACG00000015747 I
nfat5b Danio rerio ENSDARG00000102556 I
nfat5b Oryzias latipes ENSORLG00000007600 I
nfat5b Takifugu rubripes ENSTRUG00000017537 I
Ogr16826 Ophisaurus gracilis Ogr16826 I
Pvit_16277 Pogona vitticeps Pvit_16277 I
Tal_R006778 Tyto alba Tal_R006778 I