CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000010028
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000010028
T089910_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP41
M04597_2.00
Homo sapiens
NGCTAACTCTCCRYN
NRYGGAGAGTTAGCN
SELEX
Yin et al.(2017)
ZFP41_FL_HT-SELEX
0.809
0.913
ZFP41
M04598_2.00
Homo sapiens
BGCTAACTCTCCRCN
NGYGGAGAGTTAGCV
SELEX
Yin et al.(2017)
ZFP41_FL_Methyl-HT-SELEX
0.809
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000009001
C2H2 ZF
87
109
YECSECGRIFKHKTDHIRHQRVH
ENSCPOP00000009001
C2H2 ZF
115
137
FKCDECGKTFRHSSDVTKHQRIH
ENSCPOP00000009001
C2H2 ZF
143
165
FKCRECGKAFNCGSNLLKHQKTH
ENSCPOP00000009001
C2H2 ZF
171
193
YECEECGKAFAYSSCLIRHRKRH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTSYG00000005406
Tarsius syrichta
ENSTSYG00000005406
I
0.819
ENSSTOG00000022550
Ictidomys tridecemlineatus
ENSSTOG00000022550
I
0.812
Zfp41
Rattus norvegicus
ENSRNOG00000007489
I
0.810
ZFP41
Homo sapiens
ENSG00000181638
D
0.809
AC138696.1
Homo sapiens
ENSG00000264668
I
0.809
ZFP41
Pan troglodytes
ENSPTRG00000040000
I
0.809
Zfp41
Mus musculus
ENSMUSG00000047003
I
0.807
ENSCSAG00000018633
Chlorocebus sabaeus
ENSCSAG00000018633
I
0.797
ENSCAFG00000029869
Canis familiaris
ENSCAFG00000029869
I
0.795
ENSTTRG00000002889
Tursiops truncatus
ENSTTRG00000002889
I
0.795
ENSCJAG00000038069
Callithrix jacchus
ENSCJAG00000038069
I
0.794
ENSTBEG00000012843
Tupaia belangeri
ENSTBEG00000012843
I
0.785
Myotis_brandtii_ZFP41_10003885
Myotis brandtii
Myotis_brandtii_ZFP41_10003885
I
0.763