ZNF550 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000014068 T096435_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000013717 C2H2 ZF 171 193
ENSGGOP00000013717 C2H2 ZF 199 221
ENSGGOP00000013717 C2H2 ZF 227 249
ENSGGOP00000013717 C2H2 ZF 255 277
ENSGGOP00000013717 C2H2 ZF 283 305
ENSGGOP00000013717 C2H2 ZF 311 333
ENSGGOP00000013717 C2H2 ZF 339 361
ENSGGOP00000013717 C2H2 ZF 367 389

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000001629 Chlorocebus sabaeus ENSCSAG00000001629 I 0.827
ZNF550 Homo sapiens ENSG00000251369 D 0.827
ZNF550 Macaca mulatta ENSMMUG00000006122 I 0.827
ENSNLEG00000010977 Nomascus leucogenys ENSNLEG00000010977 I 0.827
ZNF550 Pan troglodytes ENSPTRG00000011560 I 0.827
ENSMMUP00000031401 Macaca fascicularis ENSMMUP00000031401 I 0.827
ENSTSYG00000004591 Tarsius syrichta ENSTSYG00000004591 I 0.819
ENSAMEG00000004910 Ailuropoda melanoleuca ENSAMEG00000004910 I 0.817
ZNF550 Canis familiaris ENSCAFG00000002421 I 0.817
ZNF550 Callithrix jacchus ENSCJAG00000000044 I 0.816
ENSMPUG00000006298 Mustela putorius furo ENSMPUG00000006298 I 0.812
ZNF550 Tursiops truncatus ENSTTRG00000000293 I 0.800
ENSOARG00000003673 Ovis aries ENSOARG00000003673 I 0.784