CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SP2
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000002140
T105679_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.827
1.000
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM
KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.827
1.000
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.827
1.000
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.827
1.000
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.827
1.000
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.827
1.000
SP2
M10250_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.827
1.000
SP2
M10251_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.827
1.000
SP2
M10252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.827
1.000
SP2
M10253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.827
1.000
SP2
M10254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.827
1.000
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000002017
C2H2 ZF
525
549
HVCHIPDCGKTFRKTSLLRAHVRLH
ENSPCAP00000002017
C2H2 ZF
555
579
FVCNWFFCGKRFTRSDELQRHARTH
ENSPCAP00000002017
C2H2 ZF
585
607
FECAQCQKRFMRSDHLTKHYKTH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004772
Ailuropoda melanoleuca
ENSAMEG00000004772
I
0.827
SP2
Bos taurus
ENSBTAG00000013740
I
0.827
SP2
Canis familiaris
ENSCAFG00000016812
I
0.827
ENSCHOG00000008313
Choloepus hoffmanni
ENSCHOG00000008313
I
0.827
SP2
Callithrix jacchus
ENSCJAG00000007713
I
0.827
SP2
Cavia porcellus
ENSCPOG00000014943
I
0.827
ENSCSAG00000002567
Chlorocebus sabaeus
ENSCSAG00000002567
I
0.827
SP2
Equus caballus
ENSECAG00000012859
I
0.827
SP2
Erinaceus europaeus
ENSEEUG00000014248
I
0.827
SP2
Echinops telfairi
ENSETEG00000009168
I
0.827
SP2
Felis catus
ENSFCAG00000009365
I
0.827
SP2
Homo sapiens
ENSG00000167182
D
0.827
SP2
Gorilla gorilla
ENSGGOG00000005330
I
0.827
SP2
Loxodonta africana
ENSLAFG00000021817
I
0.827
ENSMICG00000014053
Microcebus murinus
ENSMICG00000014053
I
0.827
SP2
Myotis lucifugus
ENSMLUG00000005000
I
0.827
SP2
Macaca mulatta
ENSMMUG00000004765
I
0.827
ENSMPUG00000015289
Mustela putorius furo
ENSMPUG00000015289
I
0.827
Sp2
Mus musculus
ENSMUSG00000018678
D
0.827
ENSNLEG00000002058
Nomascus leucogenys
ENSNLEG00000002058
I
0.827
ENSOARG00000007752
Ovis aries
ENSOARG00000007752
I
0.827
SP2
Oryctolagus cuniculus
ENSOCUG00000027415
I
0.827
SP2
Otolemur garnettii
ENSOGAG00000030380
I
0.827
ENSPANG00000022922
Papio anubis
ENSPANG00000022922
I
0.827
ENSPPYG00000008885
Pongo abelii
ENSPPYG00000008885
I
0.827
SP2
Pan troglodytes
ENSPTRG00000009342
I
0.827
SP2
Pteropus vampyrus
ENSPVAG00000004255
I
0.827
Sp2
Rattus norvegicus
ENSRNOG00000010492
I
0.827
SP2
Sorex araneus
ENSSARG00000003559
I
0.827
ENSSTOG00000015926
Ictidomys tridecemlineatus
ENSSTOG00000015926
I
0.827
ENSP00000365931
Macaca fascicularis
ENSP00000365931
I
0.827
Myotis_brandtii_SP2_10030436
Myotis brandtii
Myotis_brandtii_SP2_10030436
I
0.827
ENSSHAG00000005633
Sarcophilus harrisii
ENSSHAG00000005633
I
0.823
SP2
Tursiops truncatus
ENSTTRG00000012483
I
0.814
SP2
Gallus gallus
ENSGALG00000000233
I
0.807
ENSLACG00000006434
Latimeria chalumnae
ENSLACG00000006434
I
0.807
ENSLOCG00000013729
Lepisosteus oculatus
ENSLOCG00000013729
I
0.807
Aan_R002402
Calypte anna
Aan_R002402
I
0.807
Alligator_sinensis_CCG014457.1
Alligator sinensis
Alligator_sinensis_CCG014457.1
I
0.807
Ogr12593
Ophisaurus gracilis
Ogr12593
I
0.807
Pvit_13958
Pogona vitticeps
Pvit_13958
I
0.807
sp2
Xenopus tropicalis
XB-GENE-968274
I
0.806
sp2.S
Xenopus laevis
XB-GENE-968279
I
0.806
sp2
Gasterosteus aculeatus
ENSGACG00000019811
I
0.804
ENSGMOG00000007030
Gadus morhua
ENSGMOG00000007030
I
0.804
ENSONIG00000000117
Oreochromis niloticus
ENSONIG00000000117
I
0.804
ENSPFOG00000013068
Poecilia formosa
ENSPFOG00000013068
I
0.804
ENSXMAG00000014321
Xiphophorus maculatus
ENSXMAG00000014321
I
0.804
SP2
Anolis carolinensis
ENSACAG00000006793
I
0.803
sp2
Danio rerio
ENSDARG00000076763
I
0.800
sp2
Oryzias latipes
ENSORLG00000000102
I
0.800
sp2
Tetraodon nigroviridis
ENSTNIG00000006290
I
0.800
sp2
Takifugu rubripes
ENSTRUG00000007642
I
0.800
SP2
Monodelphis domestica
ENSMODG00000012452
I
0.797
ENSAMXG00000018374
Astyanax mexicanus
ENSAMXG00000018374
I
0.796