CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000012659
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000012659
T107111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF11
M00242_2.00
Homo sapiens
MCGCCCCC
GGGGGCGK
PBM
Barrera et al.(2016)
KLF11_REF
0.811
0.986
KLF11
M04554_2.00
Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX
0.811
0.986
KLF11
M10261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKLF_Q5
0.811
0.986
KLF11
M00241_2.00
Homo sapiens
MCGCCCMC
GKGGGCGK
PBM
Barrera et al.(2016)
KLF11_R402Q
0.811
0.986
KLF11
M04555_2.00
Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX
0.811
0.986
KLF10
M04489_2.00
Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX
0.775
0.855
KLF10
M08246_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF10
0.775
0.855
KLF10
M08317_2.00
Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS
ChIP-seq
Schmitges et al.(2016)
Q13118.MEME
0.775
0.855
KLF10
M10228_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TIEG1_Q6
0.775
0.855
KLF10
M04490_2.00
Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX
0.775
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000014132
C2H2 ZF
394
418
YVCSFPGCRKTYFKSSHLKAHLRTH
ENSPPYP00000014132
C2H2 ZF
424
448
FTCSWDGCDKKFARSDELSRHRRTH
ENSPPYP00000014132
C2H2 ZF
454
476
FVCPVCDRRFMRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g120870
Brassica oleracea
Bo2g120870
N
evm.TU.supercontig_216.26
Carica papaya
evm.TU.supercontig_216.26
N
GLYMA01G27910
Glycine max
GLYMA01G27910
N
GSMUA_Achr7G24170_001
Musa acuminata
GSMUA_Achr7G24170_001
N
LjSGA_035034.1
Lotus japonicus
LjSGA_035034.1
N
LPERR01G37530
Leersia perrieri
LPERR01G37530
N
mgf023939m
Mimulus guttatus
mgf023939m
N
OLONG_003514
Oryza longistaminata
OLONG_003514
N
OLONG_014599
Oryza longistaminata
OLONG_014599
N
OLONG_017398
Oryza longistaminata
OLONG_017398
N
OMERI01G40020
Oryza meridionalis
OMERI01G40020
N
Pavir.Ib03390
Panicum virgatum
Pavir.Ib03390
N
PDK_20s1331901g003
Phoenix dactylifera
PDK_20s1331901g003
N
SELMODRAFT_9108
Selaginella moellendorffii
SELMODRAFT_9108
N
SELMODRAFT_9114
Selaginella moellendorffii
SELMODRAFT_9114
N
TRAES3BF231500020CFD_g
Triticum aestivum
TRAES3BF231500020CFD_g
N
Traes_4BL_C7F1E5ECA
Triticum aestivum
Traes_4BL_C7F1E5ECA
N
TRIUR3_22849
Triticum urartu
TRIUR3_22849
N
TRIUR3_34542
Triticum urartu
TRIUR3_34542
N