CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000018290
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000018290
T110141_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF10
M04489_2.00
Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX
0.827
0.971
KLF10
M08246_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF10
0.827
0.971
KLF10
M08317_2.00
Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS
ChIP-seq
Schmitges et al.(2016)
Q13118.MEME
0.827
0.971
KLF10
M10228_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TIEG1_Q6
0.827
0.971
KLF10
M04490_2.00
Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX
0.827
0.971
KLF11
M00242_2.00
Homo sapiens
MCGCCCCC
GGGGGCGK
PBM
Barrera et al.(2016)
KLF11_REF
0.775
0.870
KLF11
M04554_2.00
Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX
0.775
0.870
KLF11
M10261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKLF_Q5
0.775
0.870
KLF11
M00241_2.00
Homo sapiens
MCGCCCMC
GKGGGCGK
PBM
Barrera et al.(2016)
KLF11_R402Q
0.775
0.870
KLF11
M04555_2.00
Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX
0.775
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000021595
C2H2 ZF
382
406
HICSHPGCGKTYFKSSHLKAHMRTH
ENSSHAP00000021595
C2H2 ZF
412
436
FSCSWKGCERKFARSDELSRHRRTH
ENSSHAP00000021595
C2H2 ZF
442
464
FACPMCDRRFMRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.13271
Candida albicans
CaO19.13271
N
CaO19.5849
Candida albicans
CaO19.5849
N
CD36_30880
Candida dubliniensis
CD36_30880
N
CORT_0D04660
Candida orthopsilosis
CORT_0D04660
N
CPAG_04097
Candida parapsilosis
CPAG_04097
N
CTRG_00574
Candida tropicalis
CTRG_00574
N
G210_0876
Candida maltosa
G210_0876
N
PGUG_04098
Candida guilliermondii
PGUG_04098
N
PGUG_04098
Meyerozyma guilliermondii
PGUG_04098
N
SPAPADRAFT_59559
Spathaspora passalidarum
SPAPADRAFT_59559
N