CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000027819
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000027819
T110570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF10
M04489_2.00
Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX
0.827
0.986
KLF10
M08246_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF10
0.827
0.986
KLF10
M08317_2.00
Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS
ChIP-seq
Schmitges et al.(2016)
Q13118.MEME
0.827
0.986
KLF10
M10228_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TIEG1_Q6
0.827
0.986
KLF10
M04490_2.00
Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX
0.827
0.986
KLF11
M00242_2.00
Homo sapiens
MCGCCCCC
GGGGGCGK
PBM
Barrera et al.(2016)
KLF11_REF
0.775
0.855
KLF11
M04554_2.00
Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX
0.775
0.855
KLF11
M10261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKLF_Q5
0.775
0.855
KLF11
M00241_2.00
Homo sapiens
MCGCCCMC
GKGGGCGK
PBM
Barrera et al.(2016)
KLF11_R402Q
0.775
0.855
KLF11
M04555_2.00
Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX
0.775
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000006467
C2H2 ZF
367
393
RSHICSHPGCGKTYFKSSHLKAHMRTH
ENSSSCP00000006467
C2H2 ZF
399
423
FSCSWKGCERRFARSDELSRHRRTH
ENSSSCP00000006467
C2H2 ZF
429
451
FACPMCDRRFMRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
158 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
3770_YDR096W
Saccharomyces mikatae
3770_YDR096W
I
4088_Multiple
Saccharomyces paradoxus
4088_Multiple
I
4347_Multiple
Saccharomyces bayanus
4347_Multiple
I
6173_YER169W
Saccharomyces mikatae
6173_YER169W
I
6757_YER169W
Saccharomyces paradoxus
6757_YER169W
I
AACERI_AaceriAGR117C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGR117C
I
AGOS_AGR117C
Ashbya gossypii
AGOS_AGR117C
I
CAGL0L11880g
Candida glabrata
CAGL0L11880g
I
Ecym_3520
Eremothecium cymbalariae
Ecym_3520
I
GIS1
Saccharomyces cerevisiae
YDR096W
D
KAFR_0A02380
Kazachstania africana
KAFR_0A02380
I
KAFR_0B02550
Kazachstania africana
KAFR_0B02550
I
KLLA0_C17710g
Kluyveromyces lactis
KLLA0_C17710g
I
KLTH0G14454g
Lachancea thermotolerans
KLTH0G14454g
I
KLTH0G14454g
Kluyveromyces thermotolerans
KLTH0G14454g
I
KNAG_0G01870
Kazachstania naganishii
KNAG_0G01870
I
KNAG_0H03010
Kazachstania naganishii
KNAG_0H03010
I
Kpol_1032p52
Vanderwaltozyma polyspora
Kpol_1032p52
I
Kwal_23453
Kluyveromyces waltii
Kwal_23453
I
LALA0_S07e07030g
Lachancea lanzarotensis
LALA0_S07e07030g
I
NCAS_0B04840
Naumovozyma castellii
NCAS_0B04840
I
NDAI_0B02250
Naumovozyma dairenensis
NDAI_0B02250
I
RPH1
Saccharomyces cerevisiae
YER169W
D
SAKL0H17842g
Lachancea kluyveri
SAKL0H17842g
I
Scas_Contig681.19
Saccharomyces castellii
Scas_Contig681.19
I
SKUD_141701
Saccharomyces kudriavzevii
SKUD_141701
I
SU7_0636
Saccharomyces arboricola
SU7_0636
I
SU7_0955
Saccharomyces arboricola
SU7_0955
I
TBLA_0E04220
Tetrapisispora blattae
TBLA_0E04220
I
TBLA_0F03830
Tetrapisispora blattae
TBLA_0F03830
I
TDEL_0A01300
Torulaspora delbrueckii
TDEL_0A01300
I
TPHA_0A01940
Tetrapisispora phaffii
TPHA_0A01940
I
ZBAI_04846
Zygosaccharomyces bailii
ZBAI_04846
I
ZBAI_06407
Zygosaccharomyces bailii
ZBAI_06407
I
ZYRO0B11770g
Zygosaccharomyces rouxii
ZYRO0B11770g
I