zic5 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000014980 T112113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zic5
M00780_2.00 		Mus musculus
BRCCCCCYDS
SHRGGGGGYV		 PBM
Weirauch et al.(2013)
pTH2818 		0.816 0.955
ZIC5
M04471_2.00 		Homo sapiens
NKACCCCCCGCTGHGH
DCDCAGCGGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_HT-SELEX 		0.806 0.945
ZIC5
M04472_2.00 		Homo sapiens
NKACCCCCYGCTGTGM
KCACAGCRGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_Methyl-HT-SELEX 		0.806 0.945
Zic1
M00137_2.00 		Mus musculus
NCMYVBNGNK
MNCNVBRKGN		 PBM
Badis et al.(2009)
Zic1_0991 		0.770 0.918
ZIC1
M02893_2.00 		Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC1_1 		0.770 0.918
ZIC1
M04485_2.00 		Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX 		0.770 0.918
ZIC1
M04487_2.00 		Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV		 SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX 		0.770 0.918
ZIC1
M08900_2.00 		Homo sapiens
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B 		0.770 0.918
Zic1
M08990_2.00 		Mus musculus
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B 		0.770 0.918
ZIC1
M10226_2.00 		Homo sapiens
KRCNMMCYV
BRGKKNGTM		 Transfac
Matys et al.(2006)
V$ZIC1_01 		0.770 0.918
ZIC1
M10227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC1_Q2 		0.770 0.918
ZIC1
M04486_2.00 		Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX 		0.770 0.918
ZIC1
M04488_2.00 		Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX 		0.770 0.918
ZIC4
M02912_2.00 		Homo sapiens
KRCCCCCYGYDGNGH
DCNCHRCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC4_1 		0.763 0.918
ZIC4
M04566_2.00 		Homo sapiens
BVCMHCMYRYNRYGH
DCRYNRYRKGDKGBV		 SELEX
Yin et al.(2017)
ZIC4_eDBD_HT-SELEX 		0.763 0.918
ZIC4
M04567_2.00 		Homo sapiens
BRCCHCCYRYBGTKH
DMACVRYRGGDGGYV		 SELEX
Yin et al.(2017)
ZIC4_eDBD_Methyl-HT-SELEX 		0.763 0.918
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000018029 C2H2 ZF 282 300
ENSTNIP00000018029 C2H2 ZF 309 336
ENSTNIP00000018029 C2H2 ZF 342 366
ENSTNIP00000018029 C2H2 ZF 372 396
ENSTNIP00000018029 C2H2 ZF 402 426

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
zic5 Takifugu rubripes ENSTRUG00000011797 I 0.827
ENSONIG00000006787 Oreochromis niloticus ENSONIG00000006787 I 0.818
zic5 Oryzias latipes ENSORLG00000011124 I 0.818
ENSPFOG00000012158 Poecilia formosa ENSPFOG00000012158 I 0.818
ENSXMAG00000010996 Xiphophorus maculatus ENSXMAG00000010996 I 0.818
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I 0.812
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I 0.812
ENSAMEG00000004500 Ailuropoda melanoleuca ENSAMEG00000004500 I 0.806
ZIC5 Canis familiaris ENSCAFG00000005834 I 0.806
ENSCJAG00000020987 Callithrix jacchus ENSCJAG00000020987 I 0.806
ENSCSAG00000017495 Chlorocebus sabaeus ENSCSAG00000017495 I 0.806
ZIC5 Dasypus novemcinctus ENSDNOG00000046390 I 0.806
ZIC5 Erinaceus europaeus ENSEEUG00000002965 I 0.806
ZIC5 Homo sapiens ENSG00000139800 D 0.806
ZIC5 Gorilla gorilla ENSGGOG00000022385 I 0.806
ZIC5 Macaca mulatta ENSMMUG00000014821 I 0.806
ENSNLEG00000007807 Nomascus leucogenys ENSNLEG00000007807 I 0.806
ENSOARG00000004385 Ovis aries ENSOARG00000004385 I 0.806
ENSPANG00000018055 Papio anubis ENSPANG00000018055 I 0.806
ZIC5 Procavia capensis ENSPCAG00000011845 I 0.806
ENSPSIG00000009089 Pelodiscus sinensis ENSPSIG00000009089 I 0.806
ENSPTRG00000034285 Pan troglodytes ENSPTRG00000034285 I 0.806
Zic5 Rattus norvegicus ENSRNOG00000014358 I 0.806
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I 0.806
zic5.S Xenopus laevis XB-GENE-865408 I 0.806
ENSMEUG00000004592 Macropus eugenii ENSMEUG00000004592 I 0.804
ZIC5 Monodelphis domestica ENSMODG00000007733 I 0.804
Pvit_14046 Pogona vitticeps Pvit_14046 I 0.804
zic5 Danio rerio ENSDARG00000016022 I 0.803
zic5 Xenopus tropicalis XB-GENE-480775 I 0.801
CGI_10016116 Crassostrea gigas CGI_10016116 I 0.779
zic4 Danio rerio ENSDARG00000031307 I 0.777
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.777
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.777
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.777
zic4 Oryzias latipes ENSORLG00000010055 I 0.777
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.777
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.777
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.777
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.777
zic1.S Xenopus laevis XB-GENE-864815 I 0.776
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I 0.775
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I 0.774
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.772
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.772
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.772
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.772
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.772
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.772
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.772
zic4.L Xenopus laevis XB-GENE-1033019 I 0.772
ZIC1 Anolis carolinensis ENSACAG00000006947 I 0.770
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I 0.770
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I 0.770
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I 0.770
ZIC1 Callithrix jacchus ENSCJAG00000001524 I 0.770
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I 0.770
zic1 Danio rerio ENSDARG00000015567 I 0.770
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I 0.770
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I 0.770
ZIC1 Felis catus ENSFCAG00000007061 I 0.770
ZIC1 Homo sapiens ENSG00000152977 D 0.770
zic1 Gasterosteus aculeatus ENSGACG00000003678 I 0.770
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I 0.770
ZIC1 Gorilla gorilla ENSGGOG00000001101 I 0.770
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I 0.770
ZIC1 Loxodonta africana ENSLAFG00000030632 I 0.770
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I 0.770
ZIC1 Microcebus murinus ENSMICG00000014401 I 0.770
ZIC1 Macaca mulatta ENSMMUG00000004742 I 0.770
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.770
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I 0.770
Zic1 Mus musculus ENSMUSG00000032368 D 0.770
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I 0.770
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I 0.770
ZIC1 Otolemur garnettii ENSOGAG00000007465 I 0.770
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I 0.770
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.770
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I 0.770
ZIC1 Pan troglodytes ENSPTRG00000015501 I 0.770
Zic1 Rattus norvegicus ENSRNOG00000014644 I 0.770
ZIC1 Sus scrofa ENSSSCG00000011692 I 0.770
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I 0.770
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I 0.770
zic1 Takifugu rubripes ENSTRUG00000017760 I 0.770
ZIC1 Tursiops truncatus ENSTTRG00000014350 I 0.770
Aan_R013349 Calypte anna Aan_R013349 I 0.770
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I 0.770
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I 0.770
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I 0.770
ENSP00000282928 Macaca fascicularis ENSP00000282928 I 0.770
Gfo_R005436 Geospiza fortis Gfo_R005436 I 0.770
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I 0.770
Pvit_01479 Pogona vitticeps Pvit_01479 I 0.770
XP_002937379 Xenopus tropicalis XP_002937379 I 0.770
ENSECAG00000013406 Equus caballus ENSECAG00000013406 I 0.769
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I 0.768
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I 0.768
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.768
Zic4 Mus musculus ENSMUSG00000036972 I 0.767
Zic4 Rattus norvegicus ENSRNOG00000014871 I 0.767
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I 0.767
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I 0.767
ZIC1 Bos taurus ENSBTAG00000014751 I 0.766
ENSLACG00000014597 Latimeria chalumnae ENSLACG00000014597 I 0.766
Ogr15030 Ophisaurus gracilis Ogr15030 I 0.766
ZIC1 Equus caballus ENSECAG00000020355 I 0.764
SMAR005380 Strigamia maritima SMAR005380 I 0.764
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I 0.764
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I 0.763
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I 0.763
ZIC4 Bos taurus ENSBTAG00000014749 I 0.763
ZIC4 Canis familiaris ENSCAFG00000008194 I 0.763
ZIC4 Cavia porcellus ENSCPOG00000010981 I 0.763
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I 0.763
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I 0.763
ZIC4 Equus caballus ENSECAG00000020070 I 0.763
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I 0.763
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I 0.763
ZIC4 Felis catus ENSFCAG00000007059 I 0.763
ZIC4 Homo sapiens ENSG00000174963 D 0.763
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I 0.763
ZIC4 Gorilla gorilla ENSGGOG00000008924 I 0.763
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I 0.763
ZIC4 Microcebus murinus ENSMICG00000014391 I 0.763
ZIC4 Macaca mulatta ENSMMUG00000004741 I 0.763
ZIC3 Monodelphis domestica ENSMODG00000014029 I 0.763
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I 0.763
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I 0.763
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I 0.763
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I 0.763
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I 0.763
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I 0.763
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I 0.763
ZIC4 Pan troglodytes ENSPTRG00000015500 I 0.763
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I 0.763
ZIC4 Sus scrofa ENSSSCG00000011693 I 0.763
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I 0.763
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I 0.763
ZIC4 Tursiops truncatus ENSTTRG00000014343 I 0.763
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I 0.763
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I 0.763
Aan_R004772 Calypte anna Aan_R004772 I 0.763
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I 0.763
ENSP00000397695 Macaca fascicularis ENSP00000397695 I 0.763
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I 0.763
zic3 Xenopus tropicalis XB-GENE-480431 I 0.763
zic3.S Xenopus laevis XB-GENE-865376 I 0.763
LotgiG193238 Lottia gigantea LotgiG193238 I 0.760
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I 0.760
CapteG160442 Capitella teleta CapteG160442 I 0.759
zic3 Gasterosteus aculeatus ENSGACG00000017212 I 0.759
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I 0.759
ENSGMOG00000004438 Gadus morhua ENSGMOG00000004438 I 0.759
ENSLOCG00000015155 Lepisosteus oculatus ENSLOCG00000015155 I 0.759
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I 0.758
ENSPFOG00000012173 Poecilia formosa ENSPFOG00000012173 I 0.758
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I 0.758
ENSXMAG00000010995 Xiphophorus maculatus ENSXMAG00000010995 I 0.758
L798_08424 Zootermopsis nevadensis L798_08424 I 0.758
PHUM303860 Pediculus humanus PHUM303860 I 0.758
ENSAMXG00000012325 Astyanax mexicanus ENSAMXG00000012325 I 0.757
zic3 Takifugu rubripes ENSTRUG00000003550 I 0.757
ENSACAG00000003681 Anolis carolinensis ENSACAG00000003681 I 0.756
zic2a Danio rerio ENSDARG00000015554 I 0.756
ENSLOCG00000003077 Lepisosteus oculatus ENSLOCG00000003077 I 0.756
ZIC2 Monodelphis domestica ENSMODG00000007718 I 0.756
zic1 Oryzias latipes ENSORLG00000010050 I 0.756
Ogr17255 Ophisaurus gracilis Ogr17255 I 0.756
Pvit_14047 Pogona vitticeps Pvit_14047 I 0.756
zic2.L Xenopus laevis XB-GENE-482658 I 0.756
zic2.S Xenopus laevis XB-GENE-6251643 I 0.756