CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G142502
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G142502
T118601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G142502_P02
C2H2 ZF
70
92
DKCTKCSREFCSAINFRRHTRVH
GRMZM2G142502_P03
C2H2 ZF
65
87
DKCTKCSREFCSAINFRRHTRVH
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC234522.1_FG009
Zea mays
AC234522.1_FG009
N
0.827
BGIOSGA031305
Oryza indica
BGIOSGA031305
N
0.768
OBART09G20240
Oryza barthii
OBART09G20240
N
0.768
OGLUM09G20980
Oryza glumaepatula
OGLUM09G20980
N
0.768
OLONG_005584
Oryza longistaminata
OLONG_005584
N
0.768
OMERI01G25790
Oryza meridionalis
OMERI01G25790
N
0.768
ONIVA03G00390
Oryza nivara
ONIVA03G00390
N
0.768
OPUNC09G18580
Oryza punctata
OPUNC09G18580
N
0.768
ORGLA09G0165100
Oryza glaberrima
ORGLA09G0165100
N
0.768
ORUFI09G21860
Oryza rufipogon
ORUFI09G21860
N
0.768
OS09G0570200
Oryza sativa
OS09G0570200
N
0.768
GLYMA10G37780
Glycine max
GLYMA10G37780
N
0.758
GSMUA_Achr1G03120_001
Musa acuminata
GSMUA_Achr1G03120_001
N
0.758
PRUPE_ppa002336mg
Prunus persica
PRUPE_ppa002336mg
N
0.758
TCM_015200
Theobroma cacao
TCM_015200
N
0.758
Pm019310
Prunus mume
Pm019310
N
0.758
30169.m006244
Ricinus communis
30169.m006244
N
0.758
cassava18962.valid.m1
Manihot esculenta
cassava18962.valid.m1
N
0.758
mgf002951m
Mimulus guttatus
mgf002951m
N
0.758
Aquca_013_00290
Aquilegia coerulea
Aquca_013_00290
N
0.758
evm.TU.supercontig_107.76
Carica papaya
evm.TU.supercontig_107.76
N
0.758
gene13234-v1.0-hybrid
Fragaria vesca
gene13234-v1.0-hybrid
N
0.758
Gorai.004G117900
Gossypium raimondii
Gorai.004G117900
N
0.758
Gorai.008G275600
Gossypium raimondii
Gorai.008G275600
N
0.758
MDP0000291317
Malus domestica
MDP0000291317
N
0.758
PK09701.1
Cannabis sativa
PK09701.1
N
0.758
VIT_16s0050g00700
Vitis vinifera
VIT_16s0050g00700
N
0.756