CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G470422
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G470422
T118632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G470422_P01
C2H2 ZF
229
251
YTCRRCNVKRFSVLADLRTHEKH
GRMZM2G470422_P01
C2H2 ZF
251
277
HCGRDRWVCSCGTSFSRKDKLFAHVAA
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_53526
Hordeum vulgare
MLOC_53526
N
0.793
Traes_5BL_BA26BA910
Triticum aestivum
Traes_5BL_BA26BA910
N
0.793
TRIUR3_27533
Triticum urartu
TRIUR3_27533
N
0.793
BGIOSGA013905
Oryza indica
BGIOSGA013905
N
0.788
OGLUM03G40140
Oryza glumaepatula
OGLUM03G40140
N
0.788
OLONG_012144
Oryza longistaminata
OLONG_012144
N
0.788
OMERI03G37110
Oryza meridionalis
OMERI03G37110
N
0.788
ONIVA03G42150
Oryza nivara
ONIVA03G42150
N
0.788
ORGLA03G0371300
Oryza glaberrima
ORGLA03G0371300
N
0.788
ORUFI03G42070
Oryza rufipogon
ORUFI03G42070
N
0.788
OS03G0838800
Oryza sativa
OS03G0838800
N
0.788
Traes_4AL_FC7AEBB05
Triticum aestivum
Traes_4AL_FC7AEBB05
N
0.788
Sb01g001950
Sorghum bicolor
Sb01g001950
I
0.758
Si036555m.g
Setaria italica
Si036555m.g
I
0.758
Pavir.Ia00191
Panicum virgatum
Pavir.Ia00191
I
0.758
Pavir.J01834
Panicum virgatum
Pavir.J01834
I
0.758