HPODL_04127 (Ogataea parapolymorpha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HPODL_04127 T119839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YGR067C
M00029_2.00 		Saccharomyces cerevisiae
HVCCCCNC
GNGGGGBD		 PBM
Badis et al.(2008)
YGR067C_2151 		0.789 0.783
YGR067C
M01534_2.00 		Saccharomyces cerevisiae
NCCCCDCNNN
NNNGHGGGGN		 PBM
Zhu et al.(2009)
Ygr067c 		0.789 0.783
YGR067C
M07459_2.00 		Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0425.1 		0.789 0.783
YGR067C
M08528_2.00 		Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN		 Misc
DeBoer et al.(2011)
YGR067C_548 		0.789 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESW98503 C2H2 ZF 5 27
ESW98503 C2H2 ZF 33 56

Links

Other C2H2 ZF family TFs
Other Ogataea parapolymorpha TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
8484_Multiple Saccharomyces mikatae 8484_Multiple I 0.795
YGR067C Saccharomyces cerevisiae YGR067C D 0.789
8169_YGR067C Saccharomyces paradoxus 8169_YGR067C I 0.789
KUCA_T00003077001 Kuraishia capsulata KUCA_T00003077001 I 0.786
PAS_chr3_0259 Komagataella pastoris PAS_chr3_0259 I 0.786
XP_002492475.1 Pichia pastoris XP_002492475.1 I 0.786
KNAG_0D04190 Kazachstania naganishii KNAG_0D04190 I 0.779
KLLA0_B07909g Kluyveromyces lactis KLLA0_B07909g I 0.777
BN7_2468 Wickerhamomyces ciferrii BN7_2468 I 0.766
Ecym_2760 Eremothecium cymbalariae Ecym_2760 I 0.766
SPAPADRAFT_52462 Spathaspora passalidarum SPAPADRAFT_52462 I 0.766
AACERI_AaceriAFR580C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR580C I 0.765
AGOS_AFR580C Ashbya gossypii AGOS_AFR580C I 0.765
CORT_0F03430 Candida orthopsilosis CORT_0F03430 I 0.765
SAKL0H04070g Lachancea kluyveri SAKL0H04070g I 0.765
KAFR_0G03050 Kazachstania africana KAFR_0G03050 I 0.762
Kpol_472p10 Vanderwaltozyma polyspora Kpol_472p10 I 0.760
TDEL_0E01590 Torulaspora delbrueckii TDEL_0E01590 I 0.759