CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
KAFR_0A01860
(
Kazachstania africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KAFR_0A01860
T120344_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MOT3
M00912_2.00
Saccharomyces cerevisiae
NGTGCCTDY
RHAGGCACN
PBM
Gordan et al.(2011)
Mot3
0.779
0.891
MOT3
M08417_2.00
Saccharomyces cerevisiae
TRCCTD
HAGGYA
ChIP-chip
Mathelier et al.(2014)
MA0340.1
0.779
0.891
MOT3
M08539_2.00
Saccharomyces cerevisiae
TRCCTD
HAGGYA
Misc
DeBoer et al.(2011)
YMR070W_597
0.779
0.891
MOT3
M10400_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MOT3_01
0.779
0.891
MOT3
M10401_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MOT3_Q2
0.779
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF55624
C2H2 ZF
353
375
HSCHLCEKSFRRKSWLKRHLLSH
CCF55624
C2H2 ZF
381
404
FLCPWCLSRHKRKDNLLQHMKLKH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania africana
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G49930
Arabidopsis thaliana
AT3G49930
D
BGIOSGA028423
Oryza indica
BGIOSGA028423
I
Bo7g099140
Brassica oleracea
Bo7g099140
I
Bostr.6864s0249
Boechera stricta
Bostr.6864s0249
I
Cagra.4491s0013
Capsella grandiflora
Cagra.4491s0013
I
Carubv10017988m.g
Capsella rubella
Carubv10017988m.g
I
Eucgr.B02393
Eucalyptus grandis
Eucgr.B02393
N
fgenesh2_kg.5__1344__AT3G49930.1
Arabidopsis lyrata
fgenesh2_kg.5__1344__AT3G49930.1
I
LPERR07G17940
Leersia perrieri
LPERR07G17940
N
OBART07G20660
Oryza barthii
OBART07G20660
N
OGLUM07G20440
Oryza glumaepatula
OGLUM07G20440
N
OMERI07G17320
Oryza meridionalis
OMERI07G17320
N
ONIVA07G19100
Oryza nivara
ONIVA07G19100
N
OPUNC07G19500
Oryza punctata
OPUNC07G19500
N
ORGLA07G0158200
Oryza glaberrima
ORGLA07G0158200
N
ORUFI07G21520
Oryza rufipogon
ORUFI07G21520
N
ORUFI08G11110
Oryza rufipogon
ORUFI08G11110
I
OS07G0590100
Oryza sativa
OS07G0590100
N
Sb02g038390
Sorghum bicolor
Sb02g038390
N