CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KAFR_0G03050
(
Kazachstania africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KAFR_0G03050
T120376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YGR067C
M00029_2.00
Saccharomyces cerevisiae
HVCCCCNC
GNGGGGBD
PBM
Badis et al.(2008)
YGR067C_2151
0.782
0.783
YGR067C
M01534_2.00
Saccharomyces cerevisiae
NCCCCDCNNN
NNNGHGGGGN
PBM
Zhu et al.(2009)
Ygr067c
0.782
0.783
YGR067C
M07459_2.00
Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0425.1
0.782
0.783
YGR067C
M08528_2.00
Saccharomyces cerevisiae
NCCCCDCNNNNNNN
NNNNNNNGHGGGGN
Misc
DeBoer et al.(2011)
YGR067C_548
0.782
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF59337
C2H2 ZF
8
30
YVCSFCAKAFSRSEHRIRHERSH
CCF59337
C2H2 ZF
36
59
FQCNICNHAFVRRDLVQRHIKTVH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania africana
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YGR067C
Saccharomyces cerevisiae
YGR067C
D
0.782
8169_YGR067C
Saccharomyces paradoxus
8169_YGR067C
I
0.782
KNAG_0D04190
Kazachstania naganishii
KNAG_0D04190
I
0.772
TBLA_0I02700
Tetrapisispora blattae
TBLA_0I02700
N
0.771
8484_Multiple
Saccharomyces mikatae
8484_Multiple
I
0.768
HPODL_04127
Ogataea parapolymorpha
HPODL_04127
I
0.762
ZBAI_02568
Zygosaccharomyces bailii
ZBAI_02568
N
0.762
ZBAI_06964
Zygosaccharomyces bailii
ZBAI_06964
N
0.762
ZYRO0B07568g
Zygosaccharomyces rouxii
ZYRO0B07568g
N
0.762