CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG126249
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG126249
T121634_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF13
M02903_2.00
Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH
SELEX
Jolma et al.(2013)
KLF13_1
0.767
0.841
KLF13
M04537_2.00
Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX
0.767
0.841
KLF13
M04539_2.00
Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX
0.767
0.841
KLF13
M04538_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX
0.767
0.841
KLF13
M04540_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX
0.767
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP126249
C2H2 ZF
12
36
HECPYHDCGKVYGKSSHLKAHLRTH
LotgiP126249
C2H2 ZF
42
66
FPCDWSGCGKKFARSDELARHLRTH
LotgiP126249
C2H2 ZF
72
94
FSCPICEKKFMRSDHLQKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLACG00000018298
Latimeria chalumnae
ENSLACG00000018298
I
0.787
CapteG131091
Capitella teleta
CapteG131091
I
0.771
ENSOANG00000010450
Ornithorhynchus anatinus
ENSOANG00000010450
I
0.771
Sakowv30030659m.g
Saccoglossus kowalevskii
Sakowv30030659m.g
N
0.771
klf13
Xenopus tropicalis
XB-GENE-479837
I
0.771
DAPPUDRAFT_312628
Daphnia pulex
DAPPUDRAFT_312628
I
0.769
CGI_10024271
Crassostrea gigas
CGI_10024271
N
0.767
ENSAMXG00000019220
Astyanax mexicanus
ENSAMXG00000019220
N
0.767
KLF13
Callithrix jacchus
ENSCJAG00000017617
I
0.767
ENSCSAG00000006853
Chlorocebus sabaeus
ENSCSAG00000006853
I
0.767
KLF13
Echinops telfairi
ENSETEG00000014330
I
0.767
KLF13
Homo sapiens
ENSG00000169926
D
0.767
ENSLOCG00000006468
Lepisosteus oculatus
ENSLOCG00000006468
I
0.767
KLF13
Monodelphis domestica
ENSMODG00000011740
I
0.767
Klf13
Mus musculus
ENSMUSG00000052040
I
0.767
ENSNLEG00000007555
Nomascus leucogenys
ENSNLEG00000007555
I
0.767
ENSOARG00000016409
Ovis aries
ENSOARG00000016409
I
0.767
KLF13
Oryctolagus cuniculus
ENSOCUG00000011101
I
0.767
ENSOGAG00000026529
Otolemur garnettii
ENSOGAG00000026529
I
0.767
KLF13
Procavia capensis
ENSPCAG00000009647
I
0.767
KLF13
Pan troglodytes
ENSPTRG00000006860
I
0.767
KLF13
Sus scrofa
ENSSSCG00000026006
I
0.767
ENSSTOG00000022758
Ictidomys tridecemlineatus
ENSSTOG00000022758
I
0.767
KLF13
Taeniopygia guttata
ENSTGUG00000005470
I
0.767
Aan_R015091
Calypte anna
Aan_R015091
I
0.767
Afo_R014961
Aptenodytes forsteri
Afo_R014961
I
0.767
Gfo_R008822
Geospiza fortis
Gfo_R008822
I
0.767
Tal_R011003
Tyto alba
Tal_R011003
I
0.767
NEMVEDRAFT_v1g39461
Nematostella vectensis
NEMVEDRAFT_v1g39461
I
0.766
ENSAMXG00000000331
Astyanax mexicanus
ENSAMXG00000000331
I
0.763
klf13
Danio rerio
ENSDARG00000061368
I
0.763
zgc:153115
Danio rerio
ENSDARG00000069342
N
0.763
ENSGACG00000010739
Gasterosteus aculeatus
ENSGACG00000010739
I
0.763
zgc:153115
Gasterosteus aculeatus
ENSGACG00000016005
I
0.763
ENSGALG00000026590
Gallus gallus
ENSGALG00000026590
I
0.763
ENSGMOG00000002059
Gadus morhua
ENSGMOG00000002059
I
0.763
ENSGMOG00000017987
Gadus morhua
ENSGMOG00000017987
I
0.763
ENSLOCG00000014806
Lepisosteus oculatus
ENSLOCG00000014806
I
0.763
KLF13
Meleagris gallopavo
ENSMGAG00000004699
I
0.763
ENSONIG00000010668
Oreochromis niloticus
ENSONIG00000010668
N
0.763
ENSONIG00000015310
Oreochromis niloticus
ENSONIG00000015310
I
0.763
klf13
Oryzias latipes
ENSORLG00000007542
I
0.763
ENSPFOG00000004556
Poecilia formosa
ENSPFOG00000004556
I
0.763
ENSPFOG00000016517
Poecilia formosa
ENSPFOG00000016517
N
0.763
zgc:153115
Tetraodon nigroviridis
ENSTNIG00000007828
I
0.763
klf13
Tetraodon nigroviridis
ENSTNIG00000008397
I
0.763
zgc:153115
Takifugu rubripes
ENSTRUG00000003801
I
0.763
ENSXMAG00000003301
Xiphophorus maculatus
ENSXMAG00000003301
I
0.763
ENSXMAG00000004532
Xiphophorus maculatus
ENSXMAG00000004532
N
0.763
SPU_023727
Strongylocentrotus purpuratus
SPU_023727
N
0.763
TC000837
Tribolium castaneum
TC000837
I
0.763
klf13
Takifugu rubripes
ENSTRUG00000011759
I
0.762
Aqu1.219264
Amphimedon queenslandica
Aqu1.219264
I
0.760
ENSORLG00000003032
Oryzias latipes
ENSORLG00000003032
N
0.760
TriadG8990
Trichoplax adhaerens
TriadG8990
N
0.760