CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_723-fgenesh-gene-0.2
(
Pythium irregulare
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-pir_contig_723-fgenesh-gene-0.2
T122577_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000021408
C2H2 ZF
63
87
HQCPEPDCGRRFNRKYTLVEHMKTH
EPrPI00000021408
C2H2 ZF
93
117
HVCPVRTCSKRFSTSGNLSRHKRLH
EPrPI00000021408
C2H2 ZF
123
147
IECPVEGCVCTFPSDNKLEKHMKYH
EPrPI00000021408
C2H2 ZF
153
178
HVCQVGSCGKTFSTMGNLNRHTKNHH
Links
Other
C2H2 ZF
family TFs
Other
Pythium irregulare
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G008757
Pythium ultimum
PYU1_G008757
N
0.802
maker-pir_contig_2201-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2201-fgenesh-gene-0.0
N
0.782
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N
0.779
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
0.767
F443_10169
Phytophthora parasitica
F443_10169
N
0.764
fgenesh_scip_prom.28083.659
Phytophthora lateralis
fgenesh_scip_prom.28083.659
N
0.764
fgenesh_scip_prom.46568.9634
Phytophthora kernoviae
fgenesh_scip_prom.46568.9634
N
0.764
Phyra76424
Phytophthora ramorum
Phyra76424
N
0.764
e_gw1.34.32.1
Phytophthora capsici
e_gw1.34.32.1
N
0.764
maker-pir_contig_723-snap-gene-0.9
Pythium irregulare
maker-pir_contig_723-snap-gene-0.9
N
0.757