CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-piw_contig_198-snap-gene-0.25
(
Pythium iwayamai
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-piw_contig_198-snap-gene-0.25
T122591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPW00000015663
C2H2 ZF
88
112
HMCSLPECGKSFDSKWALIRHIRVH
EPrPW00000015663
C2H2 ZF
118
137
FPCTFPECDKSFAEKSAMTR
EPrPW00000015663
C2H2 ZF
172
196
FKCTEAGCTKSFKGKDYLEFHLKIH
EPrPW00000015663
C2H2 ZF
202
227
YSCDHDTCAKTFCSPKSLKKHIRLWH
Links
Other
C2H2 ZF
family TFs
Other
Pythium iwayamai
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo128284
Phytophthora sojae
Physo128284
N
0.785
F443_19094
Phytophthora parasitica
F443_19094
N
0.782
fgenesh_scip_prom.28083.11122
Phytophthora lateralis
fgenesh_scip_prom.28083.11122
N
0.782
Phyra77610
Phytophthora ramorum
Phyra77610
N
0.782
PITG_02480
Phytophthora infestans
PITG_02480
N
0.782
PYU1_G004510
Pythium ultimum
PYU1_G004510
N
0.782
snap_masked-pir_contig_42-abinit-gene-0.59
Pythium irregulare
snap_masked-pir_contig_42-abinit-gene-0.59
N
0.779
maker-pve_contig_417-snap-gene-0.20
Pythium vexans
maker-pve_contig_417-snap-gene-0.20
N
0.773