CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g96522
(
Nematostella vectensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
NEMVEDRAFT_v1g96522
T124297_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO43958
C2H2 ZF
94
115
YTCDRCGKVFAYKYYRDKHLKY
EDO43958
C2H2 ZF
126
149
FPCHLCNRSFEKRDRLRIHILHVH
EDO43958
C2H2 ZF
155
177
HQCNECGKRFSQSSSLNKHLRVH
EDO43958
C2H2 ZF
183
205
YKCPYCSKAFTASSILRTHIRQH
EDO43958
C2H2 ZF
211
234
FKCRHCGKAFASHAAHDSHVRRTH
EDO43958
C2H2 ZF
240
262
CVCEFCGKAFAQSYELKFHLNMH
Links
Other
C2H2 ZF
family TFs
Other
Nematostella vectensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g104327
Nematostella vectensis
NEMVEDRAFT_v1g104327
N
0.799
e_gw.104.41.1
Branchiostoma floridae
e_gw.104.41.1
N
0.787
e_gw.386.8.1
Branchiostoma floridae
e_gw.386.8.1
N
0.787
CapteG103287
Capitella teleta
CapteG103287
N
0.774
NEMVEDRAFT_v1g61034
Nematostella vectensis
NEMVEDRAFT_v1g61034
N
0.759
SPU_023140
Strongylocentrotus purpuratus
SPU_023140
N
0.759
SPU_026292
Strongylocentrotus purpuratus
SPU_026292
N
0.759