CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G49820
(
Oryza brachyantha
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OB01G49820
T124564_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G49820.1
C2H2 ZF
1159
1181
YPCDVDGCSMSFHTKRDLSLHKS
OB01G49820.1
C2H2 ZF
1183
1206
ICPVKGCGKKFFSHKYLLQHRKVH
OB01G49820.1
C2H2 ZF
1242
1268
YVCHEPGCAQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza brachyantha
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005011
Oryza indica
BGIOSGA005011
N
0.811
JMJ705
Oryza sativa
OS01G0907400
N
0.811
LPERR01G35650
Leersia perrieri
LPERR01G35650
N
0.811
OBART01G41100
Oryza barthii
OBART01G41100
N
0.811
OGLUM01G45290
Oryza glumaepatula
OGLUM01G45290
N
0.811
OLONG_004128
Oryza longistaminata
OLONG_004128
N
0.811
OMERI01G38090
Oryza meridionalis
OMERI01G38090
N
0.811
ONIVA01G46140
Oryza nivara
ONIVA01G46140
N
0.811
OPUNC01G39910
Oryza punctata
OPUNC01G39910
N
0.811
ORGLA01G0350200
Oryza glaberrima
ORGLA01G0350200
N
0.811
ORUFI01G44440
Oryza rufipogon
ORUFI01G44440
N
0.811