OB04G28040 (Oryza brachyantha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OB04G28040 T124587_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.786 0.844
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.786 0.822
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.785 0.800
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.769 0.667
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.765 0.667
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.764 0.644
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.764 0.644
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G28040.1 C2H2 ZF 173 195
OB04G28040.1 C2H2 ZF 237 258

Links

Other C2H2 ZF family TFs
Other Oryza brachyantha TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF276 Homo sapiens ENSG00000158805 D
ENSPSIG00000009997 Pelodiscus sinensis ENSPSIG00000009997 I
ZNF276 Taeniopygia guttata ENSTGUG00000007961 I
ENSSTOG00000013982 Ictidomys tridecemlineatus ENSSTOG00000013982 I
ZNF276 Sus scrofa ENSSSCG00000029228 I
ENSSHAG00000006045 Sarcophilus harrisii ENSSHAG00000006045 I
ZNF276 Sorex araneus ENSSARG00000003731 I
Zfp276 Rattus norvegicus ENSRNOG00000016631 I
ZNF276 Pan troglodytes ENSPTRG00000008487 I
ZNF276 Tetraodon nigroviridis ENSTNIG00000008839 I
ENSPPYG00000007673 Pongo abelii ENSPPYG00000007673 I
ENSPFOG00000011742 Poecilia formosa ENSPFOG00000011742 I
ZNF276 Procavia capensis ENSPCAG00000001610 I
ENSPANG00000022228 Papio anubis ENSPANG00000022228 I
ZNF276 Oryzias latipes ENSORLG00000015289 I
ZNF276 Ochotona princeps ENSOPRG00000016172 I
ENSONIG00000010959 Oreochromis niloticus ENSONIG00000010959 I
ZNF276 Otolemur garnettii ENSOGAG00000004891 I
ENSOARG00000014354 Ovis aries ENSOARG00000014354 I
ZNF276 Takifugu rubripes ENSTRUG00000005087 I
ZNF276 Tursiops truncatus ENSTTRG00000004416 I
ENSXMAG00000002903 Xiphophorus maculatus ENSXMAG00000002903 I
Aan_R009185 Calypte anna Aan_R009185 I
Afo_R007523 Aptenodytes forsteri Afo_R007523 I
Alligator_sinensis_CCG009047.1 Alligator sinensis Alligator_sinensis_CCG009047.1 I
Brh_R003401 Buceros rhinoceros Brh_R003401 I
Cmyd_10016754 Chelonia mydas Cmyd_10016754 I
ENSMMUP00000003371 Macaca fascicularis ENSMMUP00000003371 I
ENSP00000415836-D1 Bos grunniens ENSP00000415836-D1 I
Gfo_R000535 Geospiza fortis Gfo_R000535 I
Myotis_brandtii_ZNF276_10003797 Myotis brandtii Myotis_brandtii_ZNF276_10003797 I
Ogr16798 Ophisaurus gracilis Ogr16798 I
Pvit_16300 Pogona vitticeps Pvit_16300 I
znf276 Xenopus tropicalis XB-GENE-983669 I
ENSCSAG00000002787 Chlorocebus sabaeus ENSCSAG00000002787 I
ZNF276 Gasterosteus aculeatus ENSGACG00000002104 I
ZNF276 Felis catus ENSFCAG00000003794 I
ENSFALG00000003070 Ficedula albicollis ENSFALG00000003070 I
ENSETEG00000007978 Echinops telfairi ENSETEG00000007978 I
ENSEEUG00000012574 Erinaceus europaeus ENSEEUG00000012574 I
ZNF276 Equus caballus ENSECAG00000019563 I
ENSDORG00000012257 Dipodomys ordii ENSDORG00000012257 I
ZNF276 Dasypus novemcinctus ENSDNOG00000001856 I
ZNF276 Gallus gallus ENSGALG00000000513 I
ZNF276 Cavia porcellus ENSCPOG00000002334 I
ZNF276 Callithrix jacchus ENSCJAG00000010721 I
ZNF276 Canis familiaris ENSCAFG00000019816 I
ZNF276 Bos taurus ENSBTAG00000001904 I
ENSAPLG00000006256 Anas platyrhynchos ENSAPLG00000006256 I
ENSAMXG00000015046 Astyanax mexicanus ENSAMXG00000015046 I
ENSAMEG00000001273 Ailuropoda melanoleuca ENSAMEG00000001273 I
ZNF276 Oryctolagus cuniculus ENSOCUG00000008960 I
ZNF276 Gorilla gorilla ENSGGOG00000010960 I
ENSGMOG00000003784 Gadus morhua ENSGMOG00000003784 I
ZNF276 Loxodonta africana ENSLAFG00000018198 I
ENSLOCG00000002928 Lepisosteus oculatus ENSLOCG00000002928 I
ENSMEUG00000001901 Macropus eugenii ENSMEUG00000001901 I
ZNF276 Meleagris gallopavo ENSMGAG00000008195 I
ZNF276 Microcebus murinus ENSMICG00000003291 I
ZNF276 Myotis lucifugus ENSMLUG00000013641 I
ZNF276 Macaca mulatta ENSMMUG00000002506 I
ZNF276 Monodelphis domestica ENSMODG00000003479 I
ENSMPUG00000007237 Mustela putorius furo ENSMPUG00000007237 I
Zfp276 Mus musculus ENSMUSG00000001065 I
ENSNLEG00000015731 Nomascus leucogenys ENSNLEG00000015731 I
ZNF276 Ornithorhynchus anatinus ENSOANG00000004837 I
ZNF276 Anolis carolinensis ENSACAG00000008103 I