CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G37960
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART01G37960
T124617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G37960.1
C2H2 ZF
298
319
FRCRRCAKPFAVKGDWRTHEKN
OBART01G37960.1
C2H2 ZF
318
348
KNCGKRWFCACGSDFKHKRSLNDHVRSFGAH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000452
Oryza indica
BGIOSGA000452
N
0.827
BRADI2G55540
Brachypodium distachyon
BRADI2G55540
N
0.827
F775_11193
Aegilops tauschii
F775_11193
N
0.827
LPERR01G32600
Leersia perrieri
LPERR01G32600
N
0.827
OGLUM01G42130
Oryza glumaepatula
OGLUM01G42130
N
0.827
OMERI01G34920
Oryza meridionalis
OMERI01G34920
N
0.827
ONIVA04G25710
Oryza nivara
ONIVA04G25710
N
0.827
OPUNC01G36780
Oryza punctata
OPUNC01G36780
N
0.827
ORGLA01G0317700
Oryza glaberrima
ORGLA01G0317700
N
0.827
ORUFI01G41290
Oryza rufipogon
ORUFI01G41290
N
0.827
OS01G0859100
Oryza sativa
OS01G0859100
N
0.827
TRAES3BF099700020CFD_g
Triticum aestivum
TRAES3BF099700020CFD_g
N
0.827
BRADI2G23870
Brachypodium distachyon
BRADI2G23870
N
0.803
GRMZM2G000836
Zea mays
GRMZM2G000836
N
0.803
OB05G26090
Oryza brachyantha
OB05G26090
N
0.803
OGLUM05G19360
Oryza glumaepatula
OGLUM05G19360
N
0.803
Sb09g021850
Sorghum bicolor
Sb09g021850
N
0.803
Si022296m.g
Setaria italica
Si022296m.g
N
0.803
Pavir.J11927
Panicum virgatum
Pavir.J11927
N
0.803
PK05257.1
Cannabis sativa
PK05257.1
N
0.795
Eucgr.J01266
Eucalyptus grandis
Eucgr.J01266
N
0.782
POPTR_0001s05630
Populus trichocarpa
POPTR_0001s05630
N
0.781
SapurV1A.0445s0120
Salix purpurea
SapurV1A.0445s0120
N
0.776
SapurV1A.0445s0140
Salix purpurea
SapurV1A.0445s0140
N
0.776
GLYMA11G19060
Glycine max
GLYMA11G19060
N
0.771
GLYMA12G09400
Glycine max
GLYMA12G09400
N
0.771
GLYMA12G30930
Glycine max
GLYMA12G30930
N
0.771
GLYMA13G39370
Glycine max
GLYMA13G39370
N
0.771
PGSC0003DMG400007112
Solanum tuberosum
PGSC0003DMG400007112
N
0.771
POPTR_0004s19460
Populus trichocarpa
POPTR_0004s19460
N
0.771
POPTR_0009s14590
Populus trichocarpa
POPTR_0009s14590
N
0.771
PRUPE_ppa023619mg
Prunus persica
PRUPE_ppa023619mg
N
0.771
TCM_041441
Theobroma cacao
TCM_041441
N
0.771
WIP3
Vitis vinifera
VIT_06s0080g00270
N
0.771
Ca_07051
Cicer arietinum
Ca_07051
N
0.771
Pm001374
Prunus mume
Pm001374
N
0.771
30055.m001542
Ricinus communis
30055.m001542
N
0.771
cassava13451.valid.m1
Manihot esculenta
cassava13451.valid.m1
N
0.771
cassava16214.m1
Manihot esculenta
cassava16214.m1
N
0.771
Aquca_004_00109
Aquilegia coerulea
Aquca_004_00109
N
0.771
Aquca_006_00227
Aquilegia coerulea
Aquca_006_00227
N
0.771
Aquca_040_00077
Aquilegia coerulea
Aquca_040_00077
N
0.771
Ciclev10028757m.g
Citrus clementina
Ciclev10028757m.g
N
0.771
Eucgr.B03870
Eucalyptus grandis
Eucgr.B03870
N
0.771
evm.TU.contig_35924
Carica papaya
evm.TU.contig_35924
N
0.771
gene22042-v1.0-hybrid
Fragaria vesca
gene22042-v1.0-hybrid
N
0.771
Gorai.001G121700
Gossypium raimondii
Gorai.001G121700
N
0.771
Gorai.006G111400
Gossypium raimondii
Gorai.006G111400
N
0.771
Lus10004887.g
Linum usitatissimum
Lus10004887.g
N
0.771
Lus10020597.g
Linum usitatissimum
Lus10020597.g
N
0.771
MDP0000131949
Malus domestica
MDP0000131949
N
0.771
MDP0000300013
Malus domestica
MDP0000300013
N
0.771
orange1.1g039549m.g
Citrus sinensis
orange1.1g039549m.g
N
0.771
SapurV1A.0080s0360
Salix purpurea
SapurV1A.0080s0360
N
0.771
SapurV1A.0219s0040
Salix purpurea
SapurV1A.0219s0040
N
0.771
chr3.CM1144.10.nc
Lotus japonicus
chr3.CM1144.10.nc
N
0.771
BRADI4G33557
Brachypodium distachyon
BRADI4G33557
N
0.768
F775_14972
Aegilops tauschii
F775_14972
N
0.768
GRMZM2G084014
Zea mays
GRMZM2G084014
N
0.768
MLOC_2787
Hordeum vulgare
MLOC_2787
N
0.768
Sb02g028220
Sorghum bicolor
Sb02g028220
N
0.768
Si029897m.g
Setaria italica
Si029897m.g
N
0.768
Traes_5BL_6888AE9CB
Triticum aestivum
Traes_5BL_6888AE9CB
N
0.768
Traes_5DL_51643AC9F
Triticum aestivum
Traes_5DL_51643AC9F
N
0.768
Traes_7AS_8054DC45D
Triticum aestivum
Traes_7AS_8054DC45D
N
0.768
TRIUR3_30490
Triticum urartu
TRIUR3_30490
N
0.768
Pavir.Ba01731
Panicum virgatum
Pavir.Ba01731
N
0.768
Ca_16482
Cicer arietinum
Ca_16482
N
0.766
OBART02G07320
Oryza barthii
OBART02G07320
N
0.763
ORGLA02G0068500
Oryza glaberrima
ORGLA02G0068500
N
0.763
BGIOSGA031001
Oryza indica
BGIOSGA031001
N
0.762
BRADI3G39820
Brachypodium distachyon
BRADI3G39820
N
0.762
GRMZM2G071101
Zea mays
GRMZM2G071101
N
0.762
GRMZM2G445684
Zea mays
GRMZM2G445684
N
0.762
GSMUA_Achr4G01560_001
Musa acuminata
GSMUA_Achr4G01560_001
N
0.762
LPERR08G16620
Leersia perrieri
LPERR08G16620
N
0.762
LPERR09G10700
Leersia perrieri
LPERR09G10700
N
0.762
OB08G26650
Oryza brachyantha
OB08G26650
N
0.762
OBART08G19670
Oryza barthii
OBART08G19670
N
0.762
OGLUM08G20830
Oryza glumaepatula
OGLUM08G20830
N
0.762
OGLUM09G15150
Oryza glumaepatula
OGLUM09G15150
N
0.762
OMERI08G16450
Oryza meridionalis
OMERI08G16450
N
0.762
OMERI09G11270
Oryza meridionalis
OMERI09G11270
N
0.762
ONIVA08G21960
Oryza nivara
ONIVA08G21960
N
0.762
ONIVA09G15100
Oryza nivara
ONIVA09G15100
N
0.762
OPUNC08G17810
Oryza punctata
OPUNC08G17810
N
0.762
OPUNC09G12930
Oryza punctata
OPUNC09G12930
N
0.762
ORGLA08G0173000
Oryza glaberrima
ORGLA08G0173000
N
0.762
ORGLA09G0111700
Oryza glaberrima
ORGLA09G0111700
N
0.762
ORUFI09G15680
Oryza rufipogon
ORUFI09G15680
N
0.762
OS08G0504000
Oryza sativa
OS08G0504000
N
0.762
OS09G0485600
Oryza sativa
OS09G0485600
N
0.762
PGSC0003DMG400006808
Solanum tuberosum
PGSC0003DMG400006808
N
0.762
Sb07g028010
Sorghum bicolor
Sb07g028010
N
0.762
Si013819m.g
Setaria italica
Si013819m.g
N
0.762
Solyc01g087050.2
Solanum lycopersicum
Solyc01g087050.2
N
0.762
evm.TU.contig_31438
Carica papaya
evm.TU.contig_31438
N
0.762
Lus10029525.g
Linum usitatissimum
Lus10029525.g
N
0.762
Lus10039613.g
Linum usitatissimum
Lus10039613.g
N
0.762
Pavir.Fa00506
Panicum virgatum
Pavir.Fa00506
N
0.762
Pavir.Fb01879
Panicum virgatum
Pavir.Fb01879
N
0.762
GSMUA_Achr11G18950_001
Musa acuminata
GSMUA_Achr11G18950_001
N
0.761
GSMUA_Achr5G26210_001
Musa acuminata
GSMUA_Achr5G26210_001
N
0.761
Bo5g081360
Brassica oleracea
Bo5g081360
N
0.758
Cla000184
Citrullus lanatus
Cla000184
N
0.758
Cucsa.199850
Cucumis sativus
Cucsa.199850
N
0.758
WIP6
Arabidopsis thaliana
AT1G13290
N
0.756
Bo5g015200
Brassica oleracea
Bo5g015200
N
0.756
Bra019822
Brassica rapa
Bra019822
N
0.756
Bostr.13671s0117
Boechera stricta
Bostr.13671s0117
N
0.756
Cagra.3501s0170
Capsella grandiflora
Cagra.3501s0170
N
0.756
Carubv10012013m.g
Capsella rubella
Carubv10012013m.g
N
0.756
Thhalv10009489m.g
Eutrema salsugineum
Thhalv10009489m.g
N
0.756