CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_018459
(
Oryza longistaminata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OLONG_018459
T124855_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_018459-R1
C2H2 ZF
1247
1270
FPCDIEGCDMSFSTQQDLLLHKRD
OLONG_018459-R1
C2H2 ZF
1300
1324
LKCTWKGCKKAFKWPWARTEHMRVH
OLONG_018459-R1
C2H2 ZF
1330
1356
YECQEPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza longistaminata
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036374
Oryza indica
BGIOSGA036374
N
0.827
OBART12G08590
Oryza barthii
OBART12G08590
N
0.827
OGLUM12G09840
Oryza glumaepatula
OGLUM12G09840
N
0.827
OMERI12G06120
Oryza meridionalis
OMERI12G06120
N
0.827
ONIVA12G08260
Oryza nivara
ONIVA12G08260
N
0.827
OPUNC12G07790
Oryza punctata
OPUNC12G07790
N
0.827
ORGLA12G0080500
Oryza glaberrima
ORGLA12G0080500
N
0.827
ORUFI12G09490
Oryza rufipogon
ORUFI12G09490
N
0.827
OS12G0279100
Oryza sativa
OS12G0279100
N
0.827
LPERR12G07400
Leersia perrieri
LPERR12G07400
N
0.820
OB12G17360
Oryza brachyantha
OB12G17360
N
0.808
F775_01850
Aegilops tauschii
F775_01850
N
0.803
MLOC_55909
Hordeum vulgare
MLOC_55909
N
0.803
Traes_5AS_7E3208FD4
Triticum aestivum
Traes_5AS_7E3208FD4
N
0.803
Traes_5BS_23717182B
Triticum aestivum
Traes_5BS_23717182B
N
0.803
Traes_5DS_976CBF9EB
Triticum aestivum
Traes_5DS_976CBF9EB
N
0.803
TRIUR3_21570
Triticum urartu
TRIUR3_21570
N
0.803
BRADI4G39130
Brachypodium distachyon
BRADI4G39130
N
0.788
Pavir.Cb01041
Panicum virgatum
Pavir.Cb01041
N
0.759
Pavir.J05247
Panicum virgatum
Pavir.J05247
N
0.759