CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI02G26030
(
Oryza meridionalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OMERI02G26030
T124885_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN
NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.776
0.804
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH
DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.776
0.804
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN
NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.775
0.783
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN
NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.759
0.652
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI02G26030.1
C2H2 ZF
201
223
FQCPACKKVFRSYQALGGHRASH
OMERI02G26030.1
C2H2 ZF
265
287
HECPYCYRVFASGQALGGHKKSH
Links
Other
C2H2 ZF
family TFs
Other
Oryza meridionalis
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008755
Oryza indica
BGIOSGA008755
I
0.827
OBART02G26700
Oryza barthii
OBART02G26700
I
0.827
OGLUM02G27190
Oryza glumaepatula
OGLUM02G27190
I
0.827
ONIVA02G29150
Oryza nivara
ONIVA02G29150
I
0.827
ORGLA02G0229600
Oryza glaberrima
ORGLA02G0229600
I
0.827
ORUFI02G28150
Oryza rufipogon
ORUFI02G28150
I
0.827
OS02G0659500
Oryza sativa
OS02G0659500
I
0.827
BGIOSGA016894
Oryza indica
BGIOSGA016894
I
0.817
OBART04G21020
Oryza barthii
OBART04G21020
I
0.817
OMERI04G17450
Oryza meridionalis
OMERI04G17450
I
0.817
ONIVA04G19260
Oryza nivara
ONIVA04G19260
I
0.817
OPUNC04G18700
Oryza punctata
OPUNC04G18700
I
0.817
ORGLA04G0180800
Oryza glaberrima
ORGLA04G0180800
I
0.817
ORUFI04G22610
Oryza rufipogon
ORUFI04G22610
I
0.817
OS04G0552700
Oryza sativa
OS04G0552700
I
0.817
OB04G28040
Oryza brachyantha
OB04G28040
I
0.811
OLONG_016061
Oryza longistaminata
OLONG_016061
I
0.811
GSMUA_Achr1G01550_001
Musa acuminata
GSMUA_Achr1G01550_001
I
0.806
GSMUA_Achr4G26920_001
Musa acuminata
GSMUA_Achr4G26920_001
I
0.806
BRADI3G33100
Brachypodium distachyon
BRADI3G33100
I
0.800
GSMUA_Achr11G21040_001
Musa acuminata
GSMUA_Achr11G21040_001
I
0.800
GSMUA_Achr5G15450_001
Musa acuminata
GSMUA_Achr5G15450_001
I
0.796
TRIUR3_29692
Triticum urartu
TRIUR3_29692
I
0.796
GRMZM2G170520
Zea mays
GRMZM2G170520
I
0.793
Si010615m.g
Setaria italica
Si010615m.g
I
0.793
GSMUA_Achr4G12160_001
Musa acuminata
GSMUA_Achr4G12160_001
I
0.782
GSMUA_AchrUn_randomG03030_001
Musa acuminata
GSMUA_AchrUn_randomG03030_001
I
0.782
POPTR_0002s14460
Populus trichocarpa
POPTR_0002s14460
I
0.782
30174.m008818
Ricinus communis
30174.m008818
I
0.782
cassava19892.m1
Manihot esculenta
cassava19892.m1
I
0.782
Lus10009278.g
Linum usitatissimum
Lus10009278.g
I
0.782
Lus10015888.g
Linum usitatissimum
Lus10015888.g
I
0.782
Pavir.Ab02618
Panicum virgatum
Pavir.Ab02618
I
0.782
Eucgr.K00165
Eucalyptus grandis
Eucgr.K00165
I
0.781
SapurV1A.0033s0440
Salix purpurea
SapurV1A.0033s0440
I
0.781
ZAT4
Arabidopsis thaliana
AT2G45120
D
0.776
ZAT9
Arabidopsis thaliana
AT3G60580
D
0.776
Bo4g104940
Brassica oleracea
Bo4g104940
I
0.776
Bo6g077190
Brassica oleracea
Bo6g077190
I
0.776
Bo8g095300
Brassica oleracea
Bo8g095300
I
0.776
Bra003422
Brassica rapa
Bra003422
I
0.776
Bra007545
Brassica rapa
Bra007545
I
0.776
Bra014483
Brassica rapa
Bra014483
I
0.776
fgenesh2_kg.4__2705__AT2G45120.1
Arabidopsis lyrata
fgenesh2_kg.4__2705__AT2G45120.1
I
0.776
scaffold_503291.1
Arabidopsis lyrata
scaffold_503291.1
I
0.776
VIT_15s0021g02720
Vitis vinifera
VIT_15s0021g02720
I
0.776
Bostr.13158s0058
Boechera stricta
Bostr.13158s0058
I
0.776
Bostr.25993s0262
Boechera stricta
Bostr.25993s0262
I
0.776
Cagra.0239s0063
Capsella grandiflora
Cagra.0239s0063
I
0.776
Cagra.6011s0004
Capsella grandiflora
Cagra.6011s0004
I
0.776
Carubv10017660m.g
Capsella rubella
Carubv10017660m.g
I
0.776
Carubv10023569m.g
Capsella rubella
Carubv10023569m.g
I
0.776
evm.TU.supercontig_2070.1
Carica papaya
evm.TU.supercontig_2070.1
I
0.776
Gorai.001G175400
Gossypium raimondii
Gorai.001G175400
I
0.776
SapurV1A.0248s0230
Salix purpurea
SapurV1A.0248s0230
I
0.776
Thhalv10006508m.g
Eutrema salsugineum
Thhalv10006508m.g
I
0.776
ZAT1
Arabidopsis thaliana
AT1G02030
D
0.775
PGSC0003DMG400024550
Solanum tuberosum
PGSC0003DMG400024550
I
0.775
Solyc03g115450.1
Solanum lycopersicum
Solyc03g115450.1
I
0.775
Bostr.5325s0123
Boechera stricta
Bostr.5325s0123
I
0.775
Eucgr.D02497
Eucalyptus grandis
Eucgr.D02497
I
0.775
Gorai.004G164000
Gossypium raimondii
Gorai.004G164000
I
0.775
Gorai.008G106500
Gossypium raimondii
Gorai.008G106500
I
0.775
cassava14164.m1
Manihot esculenta
cassava14164.m1
I
0.773
PGSC0003DMG400020929
Solanum tuberosum
PGSC0003DMG400020929
I
0.770
GLYMA01G18606
Glycine max
GLYMA01G18606
I
0.766
GLYMA01G32981
Glycine max
GLYMA01G32981
I
0.766
GLYMA03G03950
Glycine max
GLYMA03G03950
I
0.766
MTR_0160s0030
Medicago truncatula
MTR_0160s0030
I
0.766
MTR_4g027440
Medicago truncatula
MTR_4g027440
I
0.766
Ca_23672
Cicer arietinum
Ca_23672
I
0.766
mgf017082m
Mimulus guttatus
mgf017082m
I
0.766
mgf021094m
Mimulus guttatus
mgf021094m
I
0.766
Ciclev10020499m.g
Citrus clementina
Ciclev10020499m.g
I
0.766
orange1.1g044606m.g
Citrus sinensis
orange1.1g044606m.g
I
0.766
Eucgr.F02262
Eucalyptus grandis
Eucgr.F02262
I
0.764
Thhalv10009894m.g
Eutrema salsugineum
Thhalv10009894m.g
I
0.762
MTR_1g018420
Medicago truncatula
MTR_1g018420
I
0.760
POPTR_0002s12010
Populus trichocarpa
POPTR_0002s12010
I
0.760
Solyc12g088390.1
Solanum lycopersicum
Solyc12g088390.1
I
0.760
VIT_03s0091g00690
Vitis vinifera
VIT_03s0091g00690
I
0.760
VIT_07s0129g00240
Vitis vinifera
VIT_07s0129g00240
I
0.760
29661.m000908
Ricinus communis
29661.m000908
I
0.760
30170.m013751
Ricinus communis
30170.m013751
I
0.760
cassava12475.valid.m1
Manihot esculenta
cassava12475.valid.m1
I
0.760
mgf006006m
Mimulus guttatus
mgf006006m
I
0.760
AZF2
Arabidopsis thaliana
AT3G19580
D
0.759
Bo1g113530
Brassica oleracea
Bo1g113530
I
0.759
Bo5g113850
Brassica oleracea
Bo5g113850
I
0.759
Bra022436
Brassica rapa
Bra022436
I
0.759
Bra038219
Brassica rapa
Bra038219
I
0.759
BRADI1G14750
Brachypodium distachyon
BRADI1G14750
I
0.759
BRADI4G03410
Brachypodium distachyon
BRADI4G03410
I
0.759
AZF2
Arabidopsis lyrata
fgenesh2_kg.3__2173__AT3G19580.2
I
0.759
GLYMA04G04760
Glycine max
GLYMA04G04760
I
0.759
GLYMA06G04840
Glycine max
GLYMA06G04840
I
0.759
GLYMA10G40400
Glycine max
GLYMA10G40400
I
0.759
GLYMA14G09760
Glycine max
GLYMA14G09760
I
0.759
GLYMA17G35430
Glycine max
GLYMA17G35430
I
0.759
MLOC_51405
Hordeum vulgare
MLOC_51405
I
0.759
MLOC_54674
Hordeum vulgare
MLOC_54674
I
0.759
MTR_1g106730
Medicago truncatula
MTR_1g106730
I
0.759
MTR_3g102980
Medicago truncatula
MTR_3g102980
I
0.759
OPUNC12G15600
Oryza punctata
OPUNC12G15600
I
0.759
OS12G0583700
Oryza sativa
OS12G0583700
I
0.759
PGSC0003DMG400002383
Solanum tuberosum
PGSC0003DMG400002383
I
0.759
PGSC0003DMG400011548
Solanum tuberosum
PGSC0003DMG400011548
I
0.759
PGSC0003DMG400028275
Solanum tuberosum
PGSC0003DMG400028275
I
0.759
PGSC0003DMG400041467
Solanum tuberosum
PGSC0003DMG400041467
I
0.759
POPTR_0009s09250
Populus trichocarpa
POPTR_0009s09250
I
0.759
POPTR_0014s01760
Populus trichocarpa
POPTR_0014s01760
I
0.759
PRUPE_ppa009924mg
Prunus persica
PRUPE_ppa009924mg
I
0.759
PRUPE_ppa011060mg
Prunus persica
PRUPE_ppa011060mg
I
0.759
Si023013m.g
Setaria italica
Si023013m.g
I
0.759
TCM_007214
Theobroma cacao
TCM_007214
I
0.759
TCM_034720
Theobroma cacao
TCM_034720
I
0.759
Traes_4BS_FE945D2FC
Triticum aestivum
Traes_4BS_FE945D2FC
I
0.759
VIT_18s0001g09230
Vitis vinifera
VIT_18s0001g09230
I
0.759
Ca_01586
Cicer arietinum
Ca_01586
I
0.759
Ca_05641
Cicer arietinum
Ca_05641
I
0.759
Ca_18364
Cicer arietinum
Ca_18364
I
0.759
Pm005390
Prunus mume
Pm005390
I
0.759
Pm021284
Prunus mume
Pm021284
I
0.759
28152.m000908
Ricinus communis
28152.m000908
I
0.759
cassava35732.valid.m1
Manihot esculenta
cassava35732.valid.m1
I
0.759
cassava43667.valid.m1
Manihot esculenta
cassava43667.valid.m1
I
0.759
Bostr.19424s0704
Boechera stricta
Bostr.19424s0704
I
0.759
Cagra.6943s0031
Capsella grandiflora
Cagra.6943s0031
I
0.759
Carubv10014391m.g
Capsella rubella
Carubv10014391m.g
I
0.759
Ciclev10002297m.g
Citrus clementina
Ciclev10002297m.g
I
0.759
Ciclev10029065m.g
Citrus clementina
Ciclev10029065m.g
I
0.759
Eucgr.G01247
Eucalyptus grandis
Eucgr.G01247
I
0.759
evm.TU.supercontig_249.7
Carica papaya
evm.TU.supercontig_249.7
I
0.759
gene02558-v1.0-hybrid
Fragaria vesca
gene02558-v1.0-hybrid
I
0.759
Gorai.002G132600
Gossypium raimondii
Gorai.002G132600
I
0.759
Gorai.008G020700
Gossypium raimondii
Gorai.008G020700
I
0.759
Gorai.010G025200
Gossypium raimondii
Gorai.010G025200
I
0.759
Gorai.013G050100
Gossypium raimondii
Gorai.013G050100
I
0.759
MDP0000198015
Malus domestica
MDP0000198015
I
0.759
MDP0000319225
Malus domestica
MDP0000319225
I
0.759
MDP0000573176
Malus domestica
MDP0000573176
I
0.759
MDP0000762756
Malus domestica
MDP0000762756
I
0.759
orange1.1g024499m.g
Citrus sinensis
orange1.1g024499m.g
I
0.759
orange1.1g038669m.g
Citrus sinensis
orange1.1g038669m.g
I
0.759
SapurV1A.0005s0440
Salix purpurea
SapurV1A.0005s0440
I
0.759
SapurV1A.0019s0280
Salix purpurea
SapurV1A.0019s0280
I
0.759
SapurV1A.0845s0100
Salix purpurea
SapurV1A.0845s0100
I
0.759
Thhalv10021307m.g
Eutrema salsugineum
Thhalv10021307m.g
I
0.759
PK10188.1
Cannabis sativa
PK10188.1
I
0.759
chr5.CM0096.480.nc
Lotus japonicus
chr5.CM0096.480.nc
I
0.759
chr5.CM0200.550.nc
Lotus japonicus
chr5.CM0200.550.nc
I
0.759