CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA03G0371300
(
Oryza glaberrima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ORGLA03G0371300
T125090_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0371300.1
C2H2 ZF
257
279
FTCRRCNVKRFSVVADLRTHEKH
ORGLA03G0371300.1
C2H2 ZF
278
305
KHCGRDRWVCSCGTSFSRKDKLFAHVAI
Links
Other
C2H2 ZF
family TFs
Other
Oryza glaberrima
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013905
Oryza indica
BGIOSGA013905
N
0.827
OGLUM03G40140
Oryza glumaepatula
OGLUM03G40140
N
0.827
OLONG_012144
Oryza longistaminata
OLONG_012144
N
0.827
OMERI03G37110
Oryza meridionalis
OMERI03G37110
N
0.827
ONIVA03G42150
Oryza nivara
ONIVA03G42150
N
0.827
ORUFI03G42070
Oryza rufipogon
ORUFI03G42070
N
0.827
OS03G0838800
Oryza sativa
OS03G0838800
N
0.827
GRMZM2G470422
Zea mays
GRMZM2G470422
N
0.788
Traes_5BL_BA26BA910
Triticum aestivum
Traes_5BL_BA26BA910
N
0.773
TRIUR3_27533
Triticum urartu
TRIUR3_27533
N
0.773
Traes_4AL_FC7AEBB05
Triticum aestivum
Traes_4AL_FC7AEBB05
N
0.767
MLOC_53526
Hordeum vulgare
MLOC_53526
N
0.763