CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0165200
(
Oryza sativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OS04G0165200
T125222_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0165200-01
C2H2 ZF
289
311
YVCGRCGGKQFAVLSDLRTHEKH
OS04T0165200-01
C2H2 ZF
312
337
CGELRWLCSCGTFFSRKDKLMGHVAL
Links
Other
C2H2 ZF
family TFs
Other
Oryza sativa
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA015622
Oryza indica
BGIOSGA015622
N
0.827
OBART04G02230
Oryza barthii
OBART04G02230
N
0.827
OGLUM04G01880
Oryza glumaepatula
OGLUM04G01880
N
0.827
OMERI04G02190
Oryza meridionalis
OMERI04G02190
N
0.827
ONIVA08G18580
Oryza nivara
ONIVA08G18580
N
0.827
OPUNC04G02200
Oryza punctata
OPUNC04G02200
N
0.827
ORGLA04G0016600
Oryza glaberrima
ORGLA04G0016600
N
0.827
ORUFI04G02970
Oryza rufipogon
ORUFI04G02970
N
0.827
GLYMA12G30285
Glycine max
GLYMA12G30285
N
0.822
GSMUA_Achr11G02230_001
Musa acuminata
GSMUA_Achr11G02230_001
N
0.822
POPTR_0004s22670
Populus trichocarpa
POPTR_0004s22670
N
0.822
PRUPE_ppa019036mg
Prunus persica
PRUPE_ppa019036mg
N
0.822
TCM_041585
Theobroma cacao
TCM_041585
N
0.822
Pm001162
Prunus mume
Pm001162
N
0.822
cassava27114.m1
Manihot esculenta
cassava27114.m1
N
0.822
cassava28521.m1
Manihot esculenta
cassava28521.m1
N
0.822
mgf025993m
Mimulus guttatus
mgf025993m
N
0.822
Ciclev10029807m.g
Citrus clementina
Ciclev10029807m.g
N
0.822
Ciclev10029984m.g
Citrus clementina
Ciclev10029984m.g
N
0.822
Eucgr.J00391
Eucalyptus grandis
Eucgr.J00391
N
0.822
gene01102-v1.0-hybrid
Fragaria vesca
gene01102-v1.0-hybrid
N
0.822
Gorai.009G090000
Gossypium raimondii
Gorai.009G090000
N
0.822
MDP0000224892
Malus domestica
MDP0000224892
N
0.822
MDP0000610922
Malus domestica
MDP0000610922
N
0.822
orange1.1g042026m.g
Citrus sinensis
orange1.1g042026m.g
N
0.822
orange1.1g044007m.g
Citrus sinensis
orange1.1g044007m.g
N
0.822
SapurV1A.0360s0140
Salix purpurea
SapurV1A.0360s0140
N
0.822
Gorai.006G104700
Gossypium raimondii
Gorai.006G104700
N
0.819
GLYMA13G39610
Glycine max
GLYMA13G39610
N
0.816
Cla001892
Citrullus lanatus
Cla001892
N
0.816
Cucsa.200410
Cucumis sativus
Cucsa.200410
N
0.816
PGSC0003DMG400000419
Solanum tuberosum
PGSC0003DMG400000419
N
0.812
Solyc11g066420.1
Solanum lycopersicum
Solyc11g066420.1
N
0.812
Ca_07000
Cicer arietinum
Ca_07000
N
0.812
Eucgr.B03926
Eucalyptus grandis
Eucgr.B03926
N
0.812
chr3.CM0070.360.nc
Lotus japonicus
chr3.CM0070.360.nc
N
0.812
GSMUA_Achr1G15330_001
Musa acuminata
GSMUA_Achr1G15330_001
N
0.811
29589.m001269
Ricinus communis
29589.m001269
N
0.806
AMTR_s00140p00061590
Amborella trichopoda
AMTR_s00140p00061590
N
0.802
VIT_06s0061g00780
Vitis vinifera
VIT_06s0061g00780
N
0.798
GLYMA12G08680
Glycine max
GLYMA12G08680
N
0.792
OGLUM08G25260
Oryza glumaepatula
OGLUM08G25260
N
0.792
ORUFI08G26260
Oryza rufipogon
ORUFI08G26260
N
0.792
GLYMA11G19810
Glycine max
GLYMA11G19810
N
0.778
LPERR08G20460
Leersia perrieri
LPERR08G20460
N
0.778
OB08G30610
Oryza brachyantha
OB08G30610
N
0.778
OPUNC08G21710
Oryza punctata
OPUNC08G21710
N
0.778
Sb07g023890
Sorghum bicolor
Sb07g023890
N
0.778
Si013894m.g
Setaria italica
Si013894m.g
N
0.778
Aquca_009_01096
Aquilegia coerulea
Aquca_009_01096
N
0.773
BGIOSGA026480
Oryza indica
BGIOSGA026480
N
0.768
BRADI3G12490
Brachypodium distachyon
BRADI3G12490
N
0.768
OLONG_023180
Oryza longistaminata
OLONG_023180
N
0.768
OMERI08G18590
Oryza meridionalis
OMERI08G18590
N
0.768
ORGLA08G0191700
Oryza glaberrima
ORGLA08G0191700
N
0.768
OS08G0562300
Oryza sativa
OS08G0562300
N
0.768
TRIUR3_12142
Triticum urartu
TRIUR3_12142
N
0.768
Pavir.Fa00049
Panicum virgatum
Pavir.Fa00049
N
0.768
Pavir.Fb02219
Panicum virgatum
Pavir.Fb02219
N
0.768