CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Physo128916
(
Phytophthora sojae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Physo128916
T126297_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo128916
C2H2 ZF
70
94
HKCPHRGCGRQFNRKYTLIEHMKTH
Physo128916
C2H2 ZF
100
124
HVCPVRSCSKRFSTSGNLSRHKRLH
Physo128916
C2H2 ZF
130
154
LECPVEGCYCAFPSDNKLDKHMQFH
Physo128916
C2H2 ZF
160
185
HVCTIGNCGKTFSTTGNLNRHVKHHH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora sojae
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.659
Phytophthora lateralis
fgenesh_scip_prom.28083.659
N
0.817
fgenesh_scip_prom.46568.9634
Phytophthora kernoviae
fgenesh_scip_prom.46568.9634
N
0.817
Phyra76424
Phytophthora ramorum
Phyra76424
N
0.817
F443_10169
Phytophthora parasitica
F443_10169
N
0.814
e_gw1.34.32.1
Phytophthora capsici
e_gw1.34.32.1
N
0.812
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N
0.782
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.776
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.776
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.776
maker-pir_contig_2201-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2201-fgenesh-gene-0.0
N
0.764
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
0.764
PYU1_G008757
Pythium ultimum
PYU1_G008757
N
0.757