CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Physo128919
(
Phytophthora sojae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Physo128919
T126300_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo128919
C2H2 ZF
29
53
YRCSEAGCHREFNRKYTLAEHVKTH
Physo128919
C2H2 ZF
59
83
HICPVPTCAKRFSTSGNLSRHKRLH
Physo128919
C2H2 ZF
89
113
LKCPVQGCICTFPSNNKLEKHMKFH
Physo128919
C2H2 ZF
120
144
VCLVPGCGKTFSTTGNLNRHLKHQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora sojae
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.9722
Phytophthora lateralis
fgenesh_scip_prom.28083.9722
N
0.808
Phyra76421
Phytophthora ramorum
Phyra76421
N
0.808
F443_10160
Phytophthora parasitica
F443_10160
N
0.801
e_gw1.2.501.1
Phytophthora capsici
e_gw1.2.501.1
N
0.801
PYU1_G008748
Pythium ultimum
PYU1_G008748
N
0.791
F443_10163
Phytophthora parasitica
F443_10163
N
0.783
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.782
PYU1_G008749
Pythium ultimum
PYU1_G008749
N
0.780
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.773
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.773
e_gw1.34.40.1
Phytophthora capsici
e_gw1.34.40.1
N
0.769